Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71413 | Soybean | nucleus | 93.1 | 92.81 |
| VIT_07s0151g00960.t01 | Wine grape | cytosol | 74.29 | 75.24 |
| PGSC0003DMT400049837 | Potato | cytosol, plastid | 72.1 | 73.02 |
| Solyc09g065290.2.1 | Tomato | cytosol, plastid | 71.79 | 72.7 |
| GSMUA_Achr7P01850_001 | Banana | plastid | 50.16 | 68.38 |
| Bra018529.1-P | Field mustard | cytosol | 67.08 | 65.64 |
| CDX97287 | Canola | cytosol | 67.08 | 65.64 |
| CDX91316 | Canola | cytosol | 66.77 | 65.34 |
| AT4G02730.1 | Thale cress | cytosol | 67.08 | 64.26 |
| CDX70436 | Canola | plastid | 31.66 | 60.48 |
| KXG36525 | Sorghum | plastid | 60.81 | 58.97 |
| TraesCS2A01G196900.1 | Wheat | plastid | 60.19 | 58.01 |
| Os07t0572000-01 | Rice | plastid | 61.44 | 57.99 |
| Zm00001d021866_P001 | Maize | plastid | 59.56 | 57.93 |
| TraesCS2B01G224500.1 | Wheat | plastid | 60.19 | 57.83 |
| Zm00001d021868_P001 | Maize | plastid | 59.25 | 57.62 |
| KRH50874 | Soybean | nucleus | 58.31 | 56.53 |
| KRH02239 | Soybean | nucleus | 57.99 | 55.89 |
| TraesCS2D01G204900.1 | Wheat | cytosol, plastid | 60.5 | 53.46 |
| HORVU2Hr1G041020.2 | Barley | cytosol, plastid | 59.87 | 53.06 |
| KRH59511 | Soybean | cytosol, nucleus | 27.27 | 29.0 |
| KRH43376 | Soybean | nucleus | 26.96 | 26.79 |
| KRG94875 | Soybean | nucleus | 26.65 | 24.64 |
| KRH06660 | Soybean | nucleus | 26.65 | 24.64 |
| KRG91764 | Soybean | cytoskeleton, cytosol, nucleus | 26.33 | 21.48 |
| KRH08668 | Soybean | nucleus | 31.35 | 20.83 |
| KRH70275 | Soybean | nucleus | 31.03 | 20.62 |
| KRH21524 | Soybean | cytosol | 14.42 | 20.44 |
| KRH35009 | Soybean | cytosol | 8.15 | 18.84 |
| KRH37298 | Soybean | cytosol | 21.63 | 18.21 |
| KRH55267 | Soybean | cytosol | 7.84 | 17.61 |
| KRH03886 | Soybean | nucleus | 24.45 | 15.18 |
| KRH57171 | Soybean | cytosol | 24.45 | 15.18 |
| KRH12069 | Soybean | nucleus | 22.26 | 14.92 |
| KRH37088 | Soybean | nucleus | 21.63 | 14.47 |
| KRH35010 | Soybean | nucleus | 7.21 | 14.29 |
| KRH13395 | Soybean | nucleus | 23.51 | 10.5 |
| KRH20750 | Soybean | nucleus | 23.51 | 10.47 |
| KRH56498 | Soybean | cytosol | 22.57 | 9.49 |
| KRG93160 | Soybean | cytosol | 22.57 | 9.49 |
| KRH20528 | Soybean | cytosol | 20.69 | 8.48 |
| KRH10790 | Soybean | cytosol | 20.38 | 7.88 |
| KRH49977 | Soybean | cytosol | 16.3 | 7.59 |
| KRH21526 | Soybean | cytosol, peroxisome | 5.96 | 3.17 |
Protein Annotations
| EntrezGene:100795103 | MapMan:12.3.3.2.3 | Gene3D:2.130.10.10 | EMBL:ACUP02006093 | InterPro:G-protein_beta_WD-40_rep | EnsemblPlantsGene:GLYMA_10G027100 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1L844 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | EnsemblPlants:KRH32024 | ProteinID:KRH32024 | ProteinID:KRH32024.1 | PFAM:PF00400 | PIRSF:PIRSF002394 |
| PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR22847 | PANTHER:PTHR22847:SF602 |
| SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000233CC61 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:2381636..2384467
Molecular Weight (calculated)
34776.2 Da
IEP (calculated)
7.732
GRAVY (calculated)
-0.124
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSATRSGG VTQTLGFKPY RHLKTLTDHE NAVSCVKFSN DGTLLASASL DKTLIIWSSA TLTLCHRLVG HSEGISDLAW SSDSHYICSA SDDRTLRIWD
101: ATVGGGCIKI LRGHDDAVFC VNFNPQSSYI VSGSFDETIK VWDVKTGKCV HTIKGHTMPV TSVHYNRDGN LIISASHDGS CKIWDTETGN LLKTLIEDKA
201: PAVSFAKFSP NGKLILAATL NDTLKLWNYG SGKCLKIYSG HVNRVYCITS TFSVTNGKYI VGGSEDHCVY IWDLQQKLVQ KLEGHTDTVI SVTCHPTENK
301: IASAGLAGDR TVRVWVQDS
101: ATVGGGCIKI LRGHDDAVFC VNFNPQSSYI VSGSFDETIK VWDVKTGKCV HTIKGHTMPV TSVHYNRDGN LIISASHDGS CKIWDTETGN LLKTLIEDKA
201: PAVSFAKFSP NGKLILAATL NDTLKLWNYG SGKCLKIYSG HVNRVYCITS TFSVTNGKYI VGGSEDHCVY IWDLQQKLVQ KLEGHTDTVI SVTCHPTENK
301: IASAGLAGDR TVRVWVQDS
001: MPSGGNGTSN GVANANSTGN AGTSGNVPIY KPYRHLKTLE GHTAAISCVK FSNDGNLLAS ASVDKTMILW SATNYSLIHR YEGHSSGISD LAWSSDSHYT
101: CSASDDCTLR IWDARSPYEC LKVLRGHTNF VFCVNFNPPS NLIVSGSFDE TIRIWEVKTG KCVRMIKAHS MPISSVHFNR DGSLIVSASH DGSCKIWDAK
201: EGTCLKTLID DKSPAVSFAK FSPNGKFILV ATLDSTLKLS NYATGKFLKV YTGHTNKVFC ITSAFSVTNG KYIVSGSEDN CVYLWDLQAR NILQRLEGHT
301: DAVISVSCHP VQNEISSSGN HLDKTIRIWK QDA
101: CSASDDCTLR IWDARSPYEC LKVLRGHTNF VFCVNFNPPS NLIVSGSFDE TIRIWEVKTG KCVRMIKAHS MPISSVHFNR DGSLIVSASH DGSCKIWDAK
201: EGTCLKTLID DKSPAVSFAK FSPNGKFILV ATLDSTLKLS NYATGKFLKV YTGHTNKVFC ITSAFSVTNG KYIVSGSEDN CVYLWDLQAR NILQRLEGHT
301: DAVISVSCHP VQNEISSSGN HLDKTIRIWK QDA
Arabidopsis Description
WDR5BCOMPASS-like H3K4 histone methylase component WDR5B [Source:UniProtKB/Swiss-Prot;Acc:Q9SY00]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.