Factsheet for Bra012303.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002827.1-P
Bra003438.1-P
Bra006246.1-P
Bra006326.1-P
Bra007317.1-P
Bra007576.1-P
Bra007832.1-P
Bra014633.1-P
Bra019106.1-P
Bra023453.1-P
Bra026439.1-P
Bra032059.1-P
Bra032760.1-P
Bra033654.1-P
Bra035336.1-P
Bra038444.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G02090.1	Bra007317.1-P	AT3G57290.1	11029466
AT1G02090.1	Bra014633.1-P	AT3G57290.1	11029466
AT1G02090.1	Bra003438.1-P	AT3G61140.1	10330469
AT1G02090.1	Bra007576.1-P	AT3G61140.1	10330469
AT1G02090.1	Bra003438.1-P	AT3G61140.1	11742986
AT1G02090.1	Bra007576.1-P	AT3G61140.1	11742986
AT1G02090.1	Bra003438.1-P	AT3G61140.1	12615944
AT1G02090.1	Bra007576.1-P	AT3G61140.1	12615944
AT1G02090.1	Bra032760.1-P	AT4G14110.1	10330469
AT1G02090.1	Bra038444.1-P	AT4G14110.1	10330469
AT1G02090.1	Bra032760.1-P	AT4G14110.1	12615944
AT1G02090.1	Bra038444.1-P	AT4G14110.1	12615944
AT1G02090.1	Bra019106.1-P	AT4G26430.1	11742986
AT1G02090.1	Bra026439.1-P	AT4G26430.1	11742986
AT1G02090.1	Bra006246.1-P	AT5G14250.1	11742986
AT1G02090.1	Bra006326.1-P	AT5G14250.1	11742986
AT1G02090.1	Bra023453.1-P	AT5G14250.1	11742986
AT1G02090.1	Bra006246.1-P	AT5G14250.1	12615944
AT1G02090.1	Bra006326.1-P	AT5G14250.1	12615944
AT1G02090.1	Bra023453.1-P	AT5G14250.1	12615944
AT1G02090.1	Bra007832.1-P	AT5G25780.1	11029466
AT1G02090.1	Bra032059.1-P	AT5G25780.1	11029466
AT1G02090.1	Bra033654.1-P	AT5G42970.1	11854419
AT1G02090.1	Bra035336.1-P	AT5G42970.1	11854419
AT1G02090.1	Bra033654.1-P	AT5G42970.1	12615944
AT1G02090.1	Bra035336.1-P	AT5G42970.1	12615944
AT1G02090.1	Bra002827.1-P	AT5G56280.1	11701877
AT1G02090.1	Bra002827.1-P	AT5G56280.1	11742986
AT1G02090.1	Bra002827.1-P	AT5G56280.1	12615944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01302	Canola	nucleus	98.46	98.46
AT1G02090.1	Thale cress	cytosol	88.08	88.08
Bra032666.1-P	Field mustard	cytoskeleton, cytosol, nucleus	88.46	87.79
Zm00001d023916_P001	Maize	cytosol	14.23	78.72
Bra033219.1-P	Field mustard	cytosol	28.08	76.84
Zm00001d020231_P001	Maize	cytosol	20.0	76.47
VIT_15s0021g01580.t01	Wine grape	cytosol	73.85	74.13
KRH13242	Soybean	cytosol	71.92	72.2
KRH20583	Soybean	cytosol	71.54	71.81
Solyc01g090290.2.1	Tomato	cytosol	70.77	71.04
GSMUA_Achr2P12070_001	Banana	cytosol	65.77	65.52
GSMUA_Achr4P21630_001	Banana	cytosol	63.08	63.32
Os07t0490800-01	Rice	cytosol, plasma membrane	28.85	61.98
PGSC0003DMT400067022	Potato	cytosol	70.38	61.82
TraesCS2D01G239100.1	Wheat	golgi	61.15	60.92
TraesCS2B01G253600.2	Wheat	nucleus	60.77	60.54
Zm00001d006410_P013	Maize	nucleus	60.77	60.54
KXG36255	Sorghum	nucleus	60.38	60.15
TraesCS2A01G228300.1	Wheat	nucleus	60.38	60.15
Zm00001d004607_P001	Maize	nucleus	38.08	60.0
HORVU2Hr1G050230.9	Barley	nucleus	60.0	59.77
Zm00001d021522_P002	Maize	cytosol, plasma membrane	60.38	56.47
KRH01071	Soybean	nucleus	60.77	56.23

Protein Annotations

EnsemblPlants:Bra012303.1	EnsemblPlants:Bra012303.1-P	EnsemblPlantsGene:Bra012303	Gene3D:1.25.40.570	InterPro:IPR000717	InterPro:PCI_dom
PANTHER:PTHR15350	PANTHER:PTHR15350:SF5	PFscan:PS50250	SMART:SM00088	SMART:SM00753	UniParc:UPI00025414A8
UniProt:M4D743	MapMan:19.2.3.3.1.7	:	:	:	:

Description

AT1G02090 (E=3e-133) FUS5, CSN7, COP15, ATCSN7 | FUS5 (FUSCA 5); MAP kinase kinase

Coordinates

chrA07:+:8680919..8682413

Molecular Weight (calculated)

29454.4 Da

IEP (calculated)

5.983

GRAVY (calculated)

-0.427

Length

260 amino acids

Sequence
(BLAST)

001: MDMEQKQAEI IDQLLRRAST CNGDSLVPLI VDATSHPSLF AFSEILALPN VAQLEGTSDS VYLDVLRLFA HGTWGDYKCN ASRIPQLSPD QILKLKQLTV
101: LTLAESNKVL PYDTLMVELD VTNVRELEDF LINDCMYAGI VRGKLDQLKR CFEVPFAAGR DLRPGQLGNM LHTLSDWLNT SENLLVSIQD KIKWADNMSE
201: VDKKHRKEAE EGVEELKKSL SMKGDFGSRG HNEMFGEPSG VMNYKEDGMR SKRRRHPVRR

Best Arabidopsis Sequence Match ( AT1G02090.1 )
(BLAST)

001: MDIEQKQAEI IDQLVKRAST CKSEALGPLI IEATSHPSLF AFSEILALPN VAQLEGTTDS VYLDLLRLFA HGTWGDYKCN ATRLPHLSPD QILKLKQLTV
101: LTLAESNKVL PYDTLMVELD VSNVRELEDF LINECMYAGI VRGKLDQLKR CFEVPFAAGR DLRPGQLGNM LHTLSNWLNT SENLLISIQD KIKWADNMSE
201: MDKKHRKEAE EGVEEVKKSL SMKGDVDIRG NKEMFGEPSG VMDYEEDGIR PKRRRHPVTR

Arabidopsis Description

CSN7COP9 signalosome complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q94JU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.