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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytoskeleton, cytosol, nucleus
Any Predictor:cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra002827.1-P
Bra003438.1-P
Bra006246.1-P
Bra006326.1-P
Bra007317.1-P
Bra007576.1-P
Bra007832.1-P
Bra014633.1-P
Bra019106.1-P
Bra023453.1-P
Bra026439.1-P
Bra032059.1-P
Bra032760.1-P
Bra033654.1-P
Bra035336.1-P
Bra038444.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G02090.1 Bra007317.1-P AT3G57290.1 11029466
AT1G02090.1 Bra014633.1-P AT3G57290.1 11029466
AT1G02090.1 Bra003438.1-P AT3G61140.1 10330469
AT1G02090.1 Bra007576.1-P AT3G61140.1 10330469
AT1G02090.1 Bra003438.1-P AT3G61140.1 11742986
AT1G02090.1 Bra007576.1-P AT3G61140.1 11742986
AT1G02090.1 Bra003438.1-P AT3G61140.1 12615944
AT1G02090.1 Bra007576.1-P AT3G61140.1 12615944
AT1G02090.1 Bra032760.1-P AT4G14110.1 10330469
AT1G02090.1 Bra038444.1-P AT4G14110.1 10330469
AT1G02090.1 Bra032760.1-P AT4G14110.1 12615944
AT1G02090.1 Bra038444.1-P AT4G14110.1 12615944
AT1G02090.1 Bra019106.1-P AT4G26430.1 11742986
AT1G02090.1 Bra026439.1-P AT4G26430.1 11742986
AT1G02090.1 Bra006246.1-P AT5G14250.1 11742986
AT1G02090.1 Bra006326.1-P AT5G14250.1 11742986
AT1G02090.1 Bra023453.1-P AT5G14250.1 11742986
AT1G02090.1 Bra006246.1-P AT5G14250.1 12615944
AT1G02090.1 Bra006326.1-P AT5G14250.1 12615944
AT1G02090.1 Bra023453.1-P AT5G14250.1 12615944
AT1G02090.1 Bra007832.1-P AT5G25780.1 11029466
AT1G02090.1 Bra032059.1-P AT5G25780.1 11029466
AT1G02090.1 Bra033654.1-P AT5G42970.1 11854419
AT1G02090.1 Bra035336.1-P AT5G42970.1 11854419
AT1G02090.1 Bra033654.1-P AT5G42970.1 12615944
AT1G02090.1 Bra035336.1-P AT5G42970.1 12615944
AT1G02090.1 Bra002827.1-P AT5G56280.1 11701877
AT1G02090.1 Bra002827.1-P AT5G56280.1 11742986
AT1G02090.1 Bra002827.1-P AT5G56280.1 12615944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38053 Canola cytosol 98.09 98.09
AT1G02090.1 Thale cress cytosol 89.69 90.38
Bra012303.1-P Field mustard nucleus 87.79 88.46
Bra033219.1-P Field mustard cytosol 28.24 77.89
Zm00001d023916_P001 Maize cytosol 13.74 76.6
VIT_15s0021g01580.t01 Wine grape cytosol 75.57 76.45
KRH13242 Soybean cytosol 73.66 74.52
KRH20583 Soybean cytosol 73.66 74.52
Zm00001d020231_P001 Maize cytosol 19.08 73.53
Solyc01g090290.2.1 Tomato cytosol 71.37 72.2
GSMUA_Achr2P12070_001 Banana cytosol 66.41 66.67
GSMUA_Achr4P21630_001 Banana cytosol 64.5 65.25
PGSC0003DMT400067022 Potato cytosol 70.99 62.84
TraesCS2D01G239100.1 Wheat golgi 61.45 61.69
TraesCS2B01G253600.2 Wheat nucleus 61.07 61.3
Zm00001d004607_P001 Maize nucleus 38.55 61.21
TraesCS2A01G228300.1 Wheat nucleus 60.69 60.92
Zm00001d006410_P013 Maize nucleus 60.69 60.92
KXG36255 Sorghum nucleus 60.31 60.54
HORVU2Hr1G050230.9 Barley nucleus 60.31 60.54
Os07t0490800-01 Rice cytosol, plasma membrane 27.48 59.5
KRH01071 Soybean nucleus 61.45 57.3
Zm00001d021522_P002 Maize cytosol, plasma membrane 60.31 56.83
Protein Annotations
EnsemblPlants:Bra032666.1EnsemblPlants:Bra032666.1-PEnsemblPlantsGene:Bra032666Gene3D:1.25.40.570InterPro:IPR000717InterPro:PCI_dom
PANTHER:PTHR15350PANTHER:PTHR15350:SF5PFscan:PS50250SEG:segSMART:SM00088SMART:SM00753
UniParc:UPI00025431CCUniProt:M4EV33MapMan:19.2.3.3.1.7:::
Description
AT1G02090 (E=1e-127) FUS5, CSN7, COP15, ATCSN7 | FUS5 (FUSCA 5); MAP kinase kinase
Coordinates
chrA09:-:37095050..37096997
Molecular Weight (calculated)
29740.7 Da
IEP (calculated)
5.882
GRAVY (calculated)
-0.410
Length
262 amino acids
Sequence
(BLAST)
001: MDMELEQKQA EIIDELVRRA STCNGEALLP IIIEATSHPS LFAFSEILAL PNVAQLEGST HSVYVDVLRL FAHGTWADYK CNASRIPHLS PDQILKLKQL
101: TVLTLAESNK VLPYDTLMAE LDVTNVRQLE DFLINDCMYA GIVRGKLDQL KRCFEVPFAA GRDLRPGQLG NMLHTLSNWL NTSENLLGSI QDKIKWADNM
201: SEIDKKHRKE AEEGVEEVKK SLSMKGDIDS RGHKEIFGEP SGVMDYEEDR IRPKRRRHPV TR
Best Arabidopsis Sequence Match ( AT1G02090.1 )
(BLAST)
001: MDIEQKQAEI IDQLVKRAST CKSEALGPLI IEATSHPSLF AFSEILALPN VAQLEGTTDS VYLDLLRLFA HGTWGDYKCN ATRLPHLSPD QILKLKQLTV
101: LTLAESNKVL PYDTLMVELD VSNVRELEDF LINECMYAGI VRGKLDQLKR CFEVPFAAGR DLRPGQLGNM LHTLSNWLNT SENLLISIQD KIKWADNMSE
201: MDKKHRKEAE EGVEEVKKSL SMKGDVDIRG NKEMFGEPSG VMDYEEDGIR PKRRRHPVTR
Arabidopsis Description
CSN7COP9 signalosome complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q94JU3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.