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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • peroxisome 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:peroxisome
PTS1:peroxisome
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra002827.1-P
Bra003438.1-P
Bra006246.1-P
Bra006326.1-P
Bra007317.1-P
Bra007576.1-P
Bra007832.1-P
Bra014633.1-P
Bra019106.1-P
Bra023453.1-P
Bra026439.1-P
Bra032059.1-P
Bra032760.1-P
Bra033654.1-P
Bra035336.1-P
Bra038444.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G02090.1 Bra007317.1-P AT3G57290.1 11029466
AT1G02090.1 Bra014633.1-P AT3G57290.1 11029466
AT1G02090.1 Bra003438.1-P AT3G61140.1 10330469
AT1G02090.1 Bra007576.1-P AT3G61140.1 10330469
AT1G02090.1 Bra003438.1-P AT3G61140.1 11742986
AT1G02090.1 Bra007576.1-P AT3G61140.1 11742986
AT1G02090.1 Bra003438.1-P AT3G61140.1 12615944
AT1G02090.1 Bra007576.1-P AT3G61140.1 12615944
AT1G02090.1 Bra032760.1-P AT4G14110.1 10330469
AT1G02090.1 Bra038444.1-P AT4G14110.1 10330469
AT1G02090.1 Bra032760.1-P AT4G14110.1 12615944
AT1G02090.1 Bra038444.1-P AT4G14110.1 12615944
AT1G02090.1 Bra019106.1-P AT4G26430.1 11742986
AT1G02090.1 Bra026439.1-P AT4G26430.1 11742986
AT1G02090.1 Bra006246.1-P AT5G14250.1 11742986
AT1G02090.1 Bra006326.1-P AT5G14250.1 11742986
AT1G02090.1 Bra023453.1-P AT5G14250.1 11742986
AT1G02090.1 Bra006246.1-P AT5G14250.1 12615944
AT1G02090.1 Bra006326.1-P AT5G14250.1 12615944
AT1G02090.1 Bra023453.1-P AT5G14250.1 12615944
AT1G02090.1 Bra007832.1-P AT5G25780.1 11029466
AT1G02090.1 Bra032059.1-P AT5G25780.1 11029466
AT1G02090.1 Bra033654.1-P AT5G42970.1 11854419
AT1G02090.1 Bra035336.1-P AT5G42970.1 11854419
AT1G02090.1 Bra033654.1-P AT5G42970.1 12615944
AT1G02090.1 Bra035336.1-P AT5G42970.1 12615944
AT1G02090.1 Bra002827.1-P AT5G56280.1 11701877
AT1G02090.1 Bra002827.1-P AT5G56280.1 11742986
AT1G02090.1 Bra002827.1-P AT5G56280.1 12615944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90073 Canola cytosol 65.26 100.0
Zm00001d023916_P001 Maize cytosol 33.68 68.09
Zm00001d020231_P001 Maize cytosol 46.32 64.71
CDY15130 Canola extracellular 65.26 55.36
Os07t0490800-01 Rice cytosol, plasma membrane 38.95 30.58
AT1G02090.1 Thale cress cytosol 80.0 29.23
Bra032666.1-P Field mustard cytoskeleton, cytosol, nucleus 77.89 28.24
Bra012303.1-P Field mustard nucleus 76.84 28.08
Solyc01g090290.2.1 Tomato cytosol 70.53 25.87
VIT_15s0021g01580.t01 Wine grape cytosol 69.47 25.48
KRH20583 Soybean cytosol 68.42 25.1
KRH13242 Soybean cytosol 67.37 24.71
GSMUA_Achr2P12070_001 Banana cytosol 63.16 22.99
PGSC0003DMT400067022 Potato cytosol 71.58 22.97
GSMUA_Achr4P21630_001 Banana cytosol 61.05 22.39
TraesCS2B01G253600.2 Wheat nucleus 61.05 22.22
TraesCS2D01G239100.1 Wheat golgi 61.05 22.22
HORVU2Hr1G050230.9 Barley nucleus 61.05 22.22
KXG36255 Sorghum nucleus 60.0 21.84
TraesCS2A01G228300.1 Wheat nucleus 60.0 21.84
Zm00001d006410_P013 Maize nucleus 60.0 21.84
Zm00001d004607_P001 Maize nucleus 37.89 21.82
Zm00001d021522_P002 Maize cytosol, plasma membrane 60.0 20.5
KRH01071 Soybean nucleus 58.95 19.93
Protein Annotations
EnsemblPlants:Bra033219.1EnsemblPlants:Bra033219.1-PEnsemblPlantsGene:Bra033219Gene3D:1.25.40.570InterPro:IPR000717InterPro:PCI_dom
PANTHER:PTHR15350PANTHER:PTHR15350:SF5SMART:SM00088SMART:SM00753UniParc:UPI000254372BUniProt:M4EWN5
MapMan:19.2.3.3.1.7:::::
Description
AT1G02090 (E=1e-029) FUS5, CSN7, COP15, ATCSN7 | FUS5 (FUSCA 5); MAP kinase kinase
Coordinates
chrA10:-:4841438..4842476
Molecular Weight (calculated)
10729.9 Da
IEP (calculated)
4.291
GRAVY (calculated)
-0.301
Length
95 amino acids
Sequence
(BLAST)
1: MEIEQKQAEI IGQLVDRASK CSGESMVLPY DNLMVELDVT NVRQLEDFLN NECMYDGIVR GKLDQLKRCF EVPFAAGRDP RPGELGDMLH ALSNL
Best Arabidopsis Sequence Match ( AT1G02090.2 )
(BLAST)
001: MDIEQKQAEI IDQLVKRAST CKSEALGPLI IEATSHPSLF AFSEILALPN VAQLEGTTDS VYLDLLRLFA HGTWGDYKCN ATRLPHLSPD QILKLKQLTV
101: LTLAESNKVL PYDTLMVELD VSNVRELEDF LINECMYAGI VRGKLDQLKR CFEVPFAAGR DLRPGQLGNM LHTLSNWLNT SENLLISIQD KIKWADNMSE
201: MDKKHRKEAE EGVEEVKKSL SMKRE
Arabidopsis Description
CSN7COP9 signalosome complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q94JU3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.