Factsheet for Bra039402.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024309.1-P
Bra029188.1-P
Bra031913.1-P
Bra037781.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13440.1	Bra029188.1-P	AT5G51110.1	21798944
AT3G13440.1	Bra024309.1-P	AT5G64560.1	21798944
AT3G13440.1	Bra031913.1-P	AT5G64560.1	21798944
AT3G13440.1	Bra037781.1-P	AT5G64560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039401.1-P	Field mustard	cytosol	39.68	96.09
Bra027435.1-P	Field mustard	cytosol	68.71	85.54
CDY07090	Canola	plasma membrane	85.48	84.39
AT3G13440.1	Thale cress	cytosol	65.81	73.38
PGSC0003DMT400061225	Potato	cytosol	51.61	68.67
Solyc12g100070.1.1	Tomato	cytosol	40.97	64.8
KRH65321	Soybean	cytosol	53.55	64.59
GSMUA_Achr1P18380_001	Banana	extracellular, plasma membrane	50.0	56.99
Zm00001d012932_P001	Maize	extracellular	45.81	51.08
EER93176	Sorghum	cytosol	46.13	51.07
HORVU5Hr1G114620.1	Barley	cytosol	46.13	49.83
TraesCS5A01G486400.1	Wheat	cytosol	46.13	49.83
TraesCS5D01G500400.1	Wheat	cytosol	46.13	49.83
Os03t0824200-01	Rice	cytosol	45.16	49.12
TraesCS5B01G500200.1	Wheat	plastid	45.48	47.96
Zm00001d011137_P001	Maize	plastid	20.32	38.65
Zm00001d051490_P001	Maize	cytosol	23.87	31.9
Zm00001d042153_P001	Maize	mitochondrion	37.74	19.76

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.2	EnsemblPlantsGene:Bra039402	EnsemblPlants:Bra039402.1	EnsemblPlants:Bra039402.1-P	InterPro:DNA_methylase_N6_adenine_CS
GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259
UniProt:M4FE81	PFAM:PF05175	ScanProsite:PS00092	PANTHER:PTHR18895	PANTHER:PTHR18895:SF71	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	InterPro:Small_mtfrase_dom	TMHMM:TMhelix	UniParc:UPI000253E94F	SEG:seg	:

Description

AT3G13440 (E=3e-116) | methyltransferase/ nucleic acid binding

Coordinates

chrScaffold000164:-:298394..299525

Molecular Weight (calculated)

34771.0 Da

IEP (calculated)

5.082

GRAVY (calculated)

0.056

Length

310 amino acids

Sequence
(BLAST)

001: MEDLIILYNL LLHTLLFHSA VAVAVAVSVA SLFGEIYPPR SFRRLPKTLF LTLTLNLQWT VMSEMTSRTA DILRVSSHRE VYEPCDDSFA LVDALLADQT
101: NLINHDPKVC MEIGCGSGYV ITSLILLLKE KLPNVHYIAT DTNQIAARVT NETLQAHGVS AEVVCTDIAS CLEKRLAGLV DVMVVNPPYV PTPEYEVGME
201: GIASAWAGGE NGRSVIDRVL PVVDRLLSEK GWFYLVTLTS NYPSEICLGM RKRGYASRIV VQRSTEEENL IILKFWRDKD EEGVDKETSS ESFVKQFSRS
301: LSSFMEKQWR

Best Arabidopsis Sequence Match ( AT3G13440.1 )
(BLAST)

001: MADQGLEESN PMDLSKHPSG IVPTPHSQVI YKMPPRIAAI RLVSSHREVY EPCDDSFALV DALLADRTNL IEHNPKICME IGCGSGYVIT SLILLLQNEV
101: PGVHYLAIDT NPIATRVTKE TLEAHGVNAD VICADLATGL EKRLAGSVDV IVVNPPYVPT PEYEVGMEGI ASAWAGGENG RTVIDKILPV VDLLLSEKGW
201: FYLVTLTSNF PAEICLMMRK KGYASRIVVQ RSTEEENLVI LKFWRDKDEE SQDKETSSSS FVSQFSKSLS SLMEKQWR

Arabidopsis Description

AT3g13440/MRP15_7 [Source:UniProtKB/TrEMBL;Acc:Q8VXU9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.