Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- mitochondrion 3
- cytosol 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
GSMUA_Achr2P18260_001 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G13440.1 | GSMUA_Achr2P18260_001 | AT5G51110.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400061225 | Potato | cytosol | 57.72 | 67.38 |
KRH65321 | Soybean | cytosol | 62.5 | 66.15 |
Solyc12g100070.1.1 | Tomato | cytosol | 45.96 | 63.78 |
CDY23600 | Canola | cytosol | 55.15 | 60.24 |
Bra027435.1-P | Field mustard | cytosol | 54.04 | 59.04 |
AT3G13440.1 | Thale cress | cytosol | 58.09 | 56.83 |
EER93176 | Sorghum | cytosol | 58.09 | 56.43 |
Zm00001d012932_P001 | Maize | extracellular | 57.35 | 56.12 |
TraesCS5A01G486400.1 | Wheat | cytosol | 58.82 | 55.75 |
TraesCS5D01G500400.1 | Wheat | cytosol | 58.82 | 55.75 |
Bra039401.1-P | Field mustard | cytosol | 26.1 | 55.47 |
HORVU5Hr1G114620.1 | Barley | cytosol | 58.46 | 55.4 |
Os03t0824200-01 | Rice | cytosol | 57.72 | 55.09 |
TraesCS5B01G500200.1 | Wheat | plastid | 58.82 | 54.42 |
CDY24184 | Canola | plastid | 56.99 | 50.32 |
Bra039402.1-P | Field mustard | endoplasmic reticulum, extracellular | 56.99 | 50.0 |
CDY07090 | Canola | plasma membrane | 56.99 | 49.36 |
Zm00001d011137_P001 | Maize | plastid | 24.26 | 40.49 |
Zm00001d051490_P001 | Maize | cytosol | 31.62 | 37.07 |
CDY43990 | Canola | nucleus | 54.41 | 32.89 |
Zm00001d042153_P001 | Maize | mitochondrion | 48.16 | 22.13 |
Protein Annotations
Gene3D:3.40.50.150 | MapMan:35.2 | InterPro:DNA_methylase_N6_adenine_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 |
GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006479 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
GO:GO:0008276 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0032259 | EnsemblPlantsGene:GSMUA_Achr1G18380_001 |
EnsemblPlants:GSMUA_Achr1P18380_001 | EnsemblPlants:GSMUA_Achr1T18380_001 | UniProt:M0S0Z6 | PFAM:PF05175 | ScanProsite:PS00092 | PANTHER:PTHR18895 |
PANTHER:PTHR18895:SF71 | InterPro:PrmC-related | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | InterPro:Small_mtfrase_dom | TIGRFAMs:TIGR00537 |
UniParc:UPI000296C410 | SEG:seg | : | : | : | : |
Description
Putative HemK methyltransferase family member 2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G18380_001]
Coordinates
chr1:+:13748207..13750988
Molecular Weight (calculated)
30041.0 Da
IEP (calculated)
5.012
GRAVY (calculated)
0.027
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAISYRSLL LFLRDVQYYS LDSTTLLMKV SRTAQIRLVS CHPEVYEPCD DSFALVDALL ADREHLIEHR PSLCMELGCG SGYVISSLAI MLGELGCGVH
101: YFATDINPDA AQVTRETLEA HGLHAEVIST DIASGLRKRL AGMIDVVVVN PPYVPTPEEE VGCKGIAASW AGGENGRTVI DRIFPVADEL LSEKGWLYMV
201: TLTANNPTQV CRMMKEKGYA SRIIVQRSTE EESLHVIKFW RDGVIANSAE GSDSWLSQFP FKSFWRSSGT SA
101: YFATDINPDA AQVTRETLEA HGLHAEVIST DIASGLRKRL AGMIDVVVVN PPYVPTPEEE VGCKGIAASW AGGENGRTVI DRIFPVADEL LSEKGWLYMV
201: TLTANNPTQV CRMMKEKGYA SRIIVQRSTE EESLHVIKFW RDGVIANSAE GSDSWLSQFP FKSFWRSSGT SA
001: MADQGLEESN PMDLSKHPSG IVPTPHSQVI YKMPPRIAAI RLVSSHREVY EPCDDSFALV DALLADRTNL IEHNPKICME IGCGSGYVIT SLILLLQNEV
101: PGVHYLAIDT NPIATRVTKE TLEAHGVNAD VICADLATGL EKRLAGSVDV IVVNPPYVPT PEYEVGMEGI ASAWAGGENG RTVIDKILPV VDLLLSEKGW
201: FYLVTLTSNF PAEICLMMRK KGYASRIVVQ RSTEEENLVI LKFWRDKDEE SQDKETSSSS FVSQFSKSLS SLMEKQWR
101: PGVHYLAIDT NPIATRVTKE TLEAHGVNAD VICADLATGL EKRLAGSVDV IVVNPPYVPT PEYEVGMEGI ASAWAGGENG RTVIDKILPV VDLLLSEKGW
201: FYLVTLTSNF PAEICLMMRK KGYASRIVVQ RSTEEENLVI LKFWRDKDEE SQDKETSSSS FVSQFSKSLS SLMEKQWR
Arabidopsis Description
AT3g13440/MRP15_7 [Source:UniProtKB/TrEMBL;Acc:Q8VXU9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.