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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • mitochondrion 3
  • cytosol 2
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr2P18260_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G13440.1 GSMUA_Achr2P18260_001 AT5G51110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400061225 Potato cytosol 57.72 67.38
KRH65321 Soybean cytosol 62.5 66.15
Solyc12g100070.1.1 Tomato cytosol 45.96 63.78
CDY23600 Canola cytosol 55.15 60.24
Bra027435.1-P Field mustard cytosol 54.04 59.04
AT3G13440.1 Thale cress cytosol 58.09 56.83
EER93176 Sorghum cytosol 58.09 56.43
Zm00001d012932_P001 Maize extracellular 57.35 56.12
TraesCS5A01G486400.1 Wheat cytosol 58.82 55.75
TraesCS5D01G500400.1 Wheat cytosol 58.82 55.75
Bra039401.1-P Field mustard cytosol 26.1 55.47
HORVU5Hr1G114620.1 Barley cytosol 58.46 55.4
Os03t0824200-01 Rice cytosol 57.72 55.09
TraesCS5B01G500200.1 Wheat plastid 58.82 54.42
CDY24184 Canola plastid 56.99 50.32
Bra039402.1-P Field mustard endoplasmic reticulum, extracellular 56.99 50.0
CDY07090 Canola plasma membrane 56.99 49.36
Zm00001d011137_P001 Maize plastid 24.26 40.49
Zm00001d051490_P001 Maize cytosol 31.62 37.07
CDY43990 Canola nucleus 54.41 32.89
Zm00001d042153_P001 Maize mitochondrion 48.16 22.13
Protein Annotations
Gene3D:3.40.50.150MapMan:35.2InterPro:DNA_methylase_N6_adenine_CSGO:GO:0003674GO:GO:0003676GO:GO:0003824
GO:GO:0005488GO:GO:0006464GO:GO:0006479GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0008276GO:GO:0009987GO:GO:0016740GO:GO:0019538GO:GO:0032259EnsemblPlantsGene:GSMUA_Achr1G18380_001
EnsemblPlants:GSMUA_Achr1P18380_001EnsemblPlants:GSMUA_Achr1T18380_001UniProt:M0S0Z6PFAM:PF05175ScanProsite:PS00092PANTHER:PTHR18895
PANTHER:PTHR18895:SF71InterPro:PrmC-relatedInterPro:SAM-dependent_MTasesSUPFAM:SSF53335InterPro:Small_mtfrase_domTIGRFAMs:TIGR00537
UniParc:UPI000296C410SEG:seg::::
Description
Putative HemK methyltransferase family member 2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G18380_001]
Coordinates
chr1:+:13748207..13750988
Molecular Weight (calculated)
30041.0 Da
IEP (calculated)
5.012
GRAVY (calculated)
0.027
Length
272 amino acids
Sequence
(BLAST)
001: MVAISYRSLL LFLRDVQYYS LDSTTLLMKV SRTAQIRLVS CHPEVYEPCD DSFALVDALL ADREHLIEHR PSLCMELGCG SGYVISSLAI MLGELGCGVH
101: YFATDINPDA AQVTRETLEA HGLHAEVIST DIASGLRKRL AGMIDVVVVN PPYVPTPEEE VGCKGIAASW AGGENGRTVI DRIFPVADEL LSEKGWLYMV
201: TLTANNPTQV CRMMKEKGYA SRIIVQRSTE EESLHVIKFW RDGVIANSAE GSDSWLSQFP FKSFWRSSGT SA
Best Arabidopsis Sequence Match ( AT3G13440.1 )
(BLAST)
001: MADQGLEESN PMDLSKHPSG IVPTPHSQVI YKMPPRIAAI RLVSSHREVY EPCDDSFALV DALLADRTNL IEHNPKICME IGCGSGYVIT SLILLLQNEV
101: PGVHYLAIDT NPIATRVTKE TLEAHGVNAD VICADLATGL EKRLAGSVDV IVVNPPYVPT PEYEVGMEGI ASAWAGGENG RTVIDKILPV VDLLLSEKGW
201: FYLVTLTSNF PAEICLMMRK KGYASRIVVQ RSTEEENLVI LKFWRDKDEE SQDKETSSSS FVSQFSKSLS SLMEKQWR
Arabidopsis Description
AT3g13440/MRP15_7 [Source:UniProtKB/TrEMBL;Acc:Q8VXU9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.