Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039401.1-P | Field mustard | cytosol | 39.57 | 85.94 |
| CDY23600 | Canola | cytosol | 71.22 | 79.52 |
| Bra027435.1-P | Field mustard | cytosol | 70.5 | 78.71 |
| PGSC0003DMT400061225 | Potato | cytosol | 57.91 | 69.1 |
| CDY24184 | Canola | plastid | 74.46 | 67.21 |
| KRH65321 | Soybean | cytosol | 61.51 | 66.54 |
| Bra039402.1-P | Field mustard | endoplasmic reticulum, extracellular | 73.38 | 65.81 |
| CDY07090 | Canola | plasma membrane | 73.38 | 64.97 |
| Solyc12g100070.1.1 | Tomato | cytosol | 45.32 | 64.29 |
| GSMUA_Achr1P18380_001 | Banana | extracellular, plasma membrane | 56.83 | 58.09 |
| Zm00001d012932_P001 | Maize | extracellular | 49.64 | 49.64 |
| EER93176 | Sorghum | cytosol | 49.64 | 49.29 |
| Os03t0824200-01 | Rice | cytosol | 50.36 | 49.12 |
| HORVU5Hr1G114620.1 | Barley | cytosol | 50.36 | 48.78 |
| TraesCS5A01G486400.1 | Wheat | cytosol | 50.36 | 48.78 |
| TraesCS5D01G500400.1 | Wheat | cytosol | 50.36 | 48.78 |
| TraesCS5B01G500200.1 | Wheat | plastid | 50.36 | 47.62 |
| CDY43990 | Canola | nucleus | 71.58 | 44.22 |
| Zm00001d011137_P001 | Maize | plastid | 21.58 | 36.81 |
| Zm00001d051490_P001 | Maize | cytosol | 26.26 | 31.47 |
| Zm00001d042153_P001 | Maize | mitochondrion | 41.01 | 19.26 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.2 | EntrezGene:820545 | UniProt:A0A178VFI6 | ProteinID:AEE75354.1 | ProteinID:ANM65250.1 |
| ArrayExpress:AT3G13440 | EnsemblPlantsGene:AT3G13440 | RefSeq:AT3G13440 | TAIR:AT3G13440 | RefSeq:AT3G13440-TAIR-G | EnsemblPlants:AT3G13440.1 |
| TAIR:AT3G13440.1 | EMBL:AY074576 | EMBL:AY097379 | Unigene:At.27985 | InterPro:DNA_methylase_N6_adenine_CS | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006479 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0008276 | GO:GO:0008757 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0032259 |
| RefSeq:NP_001327233.1 | RefSeq:NP_187952.1 | ProteinID:OAP03642.1 | PFAM:PF05175 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00092 | PANTHER:PTHR18895 | PANTHER:PTHR18895:SF71 | InterPro:PrmC-related |
| UniProt:Q8VXU9 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | InterPro:Small_mtfrase_dom | TIGRFAMs:TIGR00537 | UniParc:UPI00000A1A42 |
| SEG:seg | : | : | : | : | : |
Description
AT3g13440/MRP15_7 [Source:UniProtKB/TrEMBL;Acc:Q8VXU9]
Coordinates
chr3:+:4377097..4379575
Molecular Weight (calculated)
30765.9 Da
IEP (calculated)
4.752
GRAVY (calculated)
-0.094
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQGLEESN PMDLSKHPSG IVPTPHSQVI YKMPPRIAAI RLVSSHREVY EPCDDSFALV DALLADRTNL IEHNPKICME IGCGSGYVIT SLILLLQNEV
101: PGVHYLAIDT NPIATRVTKE TLEAHGVNAD VICADLATGL EKRLAGSVDV IVVNPPYVPT PEYEVGMEGI ASAWAGGENG RTVIDKILPV VDLLLSEKGW
201: FYLVTLTSNF PAEICLMMRK KGYASRIVVQ RSTEEENLVI LKFWRDKDEE SQDKETSSSS FVSQFSKSLS SLMEKQWR
101: PGVHYLAIDT NPIATRVTKE TLEAHGVNAD VICADLATGL EKRLAGSVDV IVVNPPYVPT PEYEVGMEGI ASAWAGGENG RTVIDKILPV VDLLLSEKGW
201: FYLVTLTSNF PAEICLMMRK KGYASRIVVQ RSTEEENLVI LKFWRDKDEE SQDKETSSSS FVSQFSKSLS SLMEKQWR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.