CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90897
EER93165

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13440.1	EER93165	AT5G51110.1	21798944
AT3G13440.1	EER90897	AT5G64560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012932_P001	Maize	extracellular	88.21	88.85
Os03t0824200-01	Rice	cytosol	76.43	75.09
TraesCS5D01G500400.1	Wheat	cytosol	76.43	74.56
TraesCS5A01G486400.1	Wheat	cytosol	76.43	74.56
HORVU5Hr1G114620.1	Barley	cytosol	76.07	74.22
TraesCS5B01G500200.1	Wheat	plastid	76.79	73.13
Zm00001d011137_P001	Maize	plastid	41.07	70.55
PGSC0003DMT400061225	Potato	cytosol	49.64	59.66
GSMUA_Achr1P18380_001	Banana	extracellular, plasma membrane	56.43	58.09
KRH65321	Soybean	cytosol	53.21	57.98
Solyc12g100070.1.1	Tomato	cytosol	40.0	57.14
CDY23600	Canola	cytosol	48.21	54.22
Bra027435.1-P	Field mustard	cytosol	47.5	53.41
Bra039401.1-P	Field mustard	cytosol	24.29	53.12
Zm00001d051490_P001	Maize	cytosol	43.93	53.02
AT3G13440.1	Thale cress	cytosol	49.29	49.64
Bra039402.1-P	Field mustard	endoplasmic reticulum, extracellular	51.07	46.13
CDY24184	Canola	plastid	50.0	45.45
CDY07090	Canola	plasma membrane	50.71	45.22
Zm00001d042153_P001	Maize	mitochondrion	68.93	32.6
CDY43990	Canola	nucleus	47.86	29.78

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.2	EntrezGene:8057351	UniProt:C5WUY3	InterPro:DNA_methylase_N6_adenine_CS	EnsemblPlants:EER93176
ProteinID:EER93176	ProteinID:EER93176.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006479
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008276	GO:GO:0008757	GO:GO:0009987
GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	PFAM:PF05175	ScanProsite:PS00092	PANTHER:PTHR18895
PANTHER:PTHR18895:SF71	InterPro:PrmC-related	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3001G031200	SUPFAM:SSF53335	unigene:Sbi.10722
unigene:Sbi.9773	InterPro:Small_mtfrase_dom	TIGRFAMs:TIGR00537	UniParc:UPI0001A8296F	RefSeq:XP_002466178.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:2389159..2391267

Molecular Weight (calculated)

29937.7 Da

IEP (calculated)

5.139

GRAVY (calculated)

-0.068

Length

280 amino acids

Sequence
(BLAST)

001: MADGDGAGAA ATGKLAELPS GAEKGLPRRA KASSGRTLNT AQIPLVASHP DVYEPCDDSF ALVDALLSDK AQLLTLQPRL CMEVGSGSGY VITSLAIMLR
101: QLGSGAQYLA TDINQHAAET TQATLEAHGV HADVIVTDIV SGLDKRLAGM VDVAVVNPPY VPTPVEEVGC KGIASSWAGG LNGRQVIDRI LPAVREMLSE
201: RGWLYMVALE DNDPSDICHL MSEMGYASRV VLKRCTEEES LYVLKFWRDP HAVSSASPKS SGSESWFSQL PFKSLWHKNS

Best Arabidopsis Sequence Match ( AT3G13440.1 )
(BLAST)

001: MADQGLEESN PMDLSKHPSG IVPTPHSQVI YKMPPRIAAI RLVSSHREVY EPCDDSFALV DALLADRTNL IEHNPKICME IGCGSGYVIT SLILLLQNEV
101: PGVHYLAIDT NPIATRVTKE TLEAHGVNAD VICADLATGL EKRLAGSVDV IVVNPPYVPT PEYEVGMEGI ASAWAGGENG RTVIDKILPV VDLLLSEKGW
201: FYLVTLTSNF PAEICLMMRK KGYASRIVVQ RSTEEENLVI LKFWRDKDEE SQDKETSSSS FVSQFSKSLS SLMEKQWR

Arabidopsis Description

AT3g13440/MRP15_7 [Source:UniProtKB/TrEMBL;Acc:Q8VXU9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.