CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0742400-01	Rice	plasma membrane	60.98	94.78
TraesCS5D01G391700.1	Wheat	plastid	91.99	91.75
HORVU5Hr1G094250.1	Barley	plastid	91.99	91.75
TraesCS5A01G382400.1	Wheat	plastid	91.47	90.31
TraesCS5B01G386300.1	Wheat	plastid	89.41	89.18
Zm00001d033969_P002	Maize	plasma membrane	89.92	87.88
VIT_05s0020g04720.t01	Wine grape	cytosol, peroxisome, plasma membrane	82.95	82.52
KRG92427	Soybean	cytosol, peroxisome, plasma membrane	81.14	79.49
KRH34378	Soybean	cytosol, peroxisome, plastid	79.84	79.23
CDX81228	Canola	cytosol, mitochondrion, plastid	74.94	78.38
Bra037781.1-P	Field mustard	cytosol, mitochondrion, plastid	76.74	77.34
Solyc03g005390.2.1	Tomato	cytosol, peroxisome, vacuole	78.81	77.22
AT5G64560.1	Thale cress	cytosol	78.55	77.16
CDY18706	Canola	cytosol, mitochondrion, plastid	76.49	77.08
CDY56489	Canola	cytosol, peroxisome, plastid	74.94	76.72
CDY51292	Canola	cytosol, peroxisome, plastid	74.68	76.45
Bra031913.1-P	Field mustard	cytosol	67.18	76.25
VIT_07s0141g00590.t01	Wine grape	cytosol	76.49	76.09
Bra024309.1-P	Field mustard	cytosol, peroxisome, plastid	76.23	75.26
CDY64845	Canola	mitochondrion, peroxisome, plastid	70.03	74.04
KRG95626	Soybean	cytosol	74.16	73.97
Bra028621.1-P	Field mustard	cytosol	73.9	73.52
CDX85800	Canola	cytosol	73.9	73.52
KRH67301	Soybean	cytosol	73.13	72.94
CDY46811	Canola	cytosol	70.54	72.8
CDY64844	Canola	cytosol	73.13	72.75
CDY31314	Canola	cytosol	71.06	71.61
Solyc09g065920.2.1	Tomato	nucleus	68.48	70.29
PGSC0003DMT400038981	Potato	mitochondrion	68.48	70.29
PGSC0003DMT400038974	Potato	cytosol	26.36	69.86
AT5G09690.2	Thale cress	cytosol	71.58	69.77
KRH33492	Soybean	cytosol	39.28	66.38
AT5G09720.2	Thale cress	cytosol	48.84	64.29
GSMUA_Achr4P22510_001	Banana	cytosol, mitochondrion, peroxisome, plastid	62.79	57.72
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	44.19	49.14
OQU81611	Sorghum	peroxisome, plasma membrane, plastid	13.95	42.52
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	44.7	39.23
KXG25477	Sorghum	plastid	36.18	39.0
EES04071	Sorghum	mitochondrion	44.44	38.83
EES01822	Sorghum	mitochondrion	40.05	37.44
KXG34188	Sorghum	plasma membrane	14.21	37.16
EES10822	Sorghum	mitochondrion	39.79	36.58
EER91996	Sorghum	mitochondrion	44.7	36.19
OQU93276	Sorghum	plastid	38.24	34.26
OQU91190	Sorghum	plastid	20.93	17.49

Protein Annotations

Gene3D:2.40.128.330	MapMan:24.3.3.1	EntrezGene:8060487	UniProt:C5X189	ncoils:Coil	EnsemblPlants:EER90897
ProteinID:EER90897	ProteinID:EER90897.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
GO:GO:0055085	GO:GO:1903830	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544	PANTHER:PTHR13890	PANTHER:PTHR13890:SF8
EnsemblPlantsGene:SORBI_3001G095000	SUPFAM:SSF144083	unigene:Sbi.1824	TMHMM:TMhelix	UniParc:UPI0001A8239B	RefSeq:XP_002463899.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:7305915..7311750

Molecular Weight (calculated)

42713.6 Da

IEP (calculated)

4.608

GRAVY (calculated)

-0.224

Length

387 amino acids

Sequence
(BLAST)

001: MAAAGAGPGP GGGEGKKRGA SRSWILLDAA GEERVLDADK YAIMHRVDIN ARDLRILDPL LSYPSTILGR ERAIVLNLEH IKAIITSDEV LLRDPSDENV
101: IPVVEELRRR LTPSNATQHD GKENLNGQHD VEGAEEDESP FEFRALEVTL EAICSFLDAR TTELETDAYP ALDELTSKIS SRNLDRVRKL KSGMTRLTAR
201: VQKVRDELEQ LLDDDDDMAD LYLSRKLAGA SSPVSGSGGP NWFPASPTIG SKISRASRAS AATVHGNEND VEELEMLLEA YFMQIDGTLN KLTTLREYID
301: DTEDYINIQL DNHRNQLIQL ELFLSSGTVC LSLYSLVAGV FGMNIPYTWN DGHGYIFKWV VIVSGLVCAF MFISIVAYAR HKGLVGS

Best Arabidopsis Sequence Match ( AT5G64560.1 )
(BLAST)

001: MAQNGYLVPA DPSAVVTVKK KTPQASWALI DATGQSEPLD VDKYEIMHRV QIHARDLRIL DPNLSYPSTI LGRERAIVLN LEHIKAIITS EEVLLRDPSD
101: ENVIPVVEEL RRRLPVGNAS HNGGQGDGKE IAGAQNDGDT GDEDESPFEF RALEVALEAI CSFLAARTAE LETAAYPALD ELTSKISSRN LDRVRKLKSA
201: MTRLTARVQK VRDELEQLLD DDDDMADLYL SRKLSSASSP ISSIGEPNWY TTSPTIGSKI SRASRASLAT VHGDENDVEE LEMLLEAYFM QIDSTLNRLT
301: TLREYIDDTE DYINIQLDNH RNQLIQLELV LSSGTVCLSM YSLVAGIFGM NIPYTWNDGH GYMFKYVVGL TGTLCVVVFV IIMSYARYKG LVGS

Arabidopsis Description

MRS2-2Magnesium transporter MRS2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.