Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037781.1-P | Field mustard | cytosol, mitochondrion, plastid | 99.74 | 99.74 |
| CDX81228 | Canola | cytosol, mitochondrion, plastid | 96.09 | 99.73 |
| CDY56489 | Canola | cytosol, peroxisome, plastid | 89.58 | 91.01 |
| CDY51292 | Canola | cytosol, peroxisome, plastid | 89.06 | 90.48 |
| AT5G64560.1 | Thale cress | cytosol | 86.46 | 84.26 |
| CDY31314 | Canola | cytosol | 82.55 | 82.55 |
| CDY46811 | Canola | cytosol | 80.47 | 82.4 |
| Os03t0742400-01 | Rice | plasma membrane | 52.86 | 81.53 |
| VIT_05s0020g04720.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 80.73 | 79.69 |
| KRG92427 | Soybean | cytosol, peroxisome, plasma membrane | 78.91 | 76.71 |
| CDY64845 | Canola | mitochondrion, peroxisome, plastid | 72.92 | 76.5 |
| EER90897 | Sorghum | cytosol | 77.08 | 76.49 |
| KRH34378 | Soybean | cytosol, peroxisome, plastid | 76.82 | 75.64 |
| TraesCS5D01G391700.1 | Wheat | plastid | 76.04 | 75.26 |
| CDX85800 | Canola | cytosol | 76.04 | 75.06 |
| HORVU5Hr1G094250.1 | Barley | plastid | 75.78 | 75.0 |
| TraesCS5A01G382400.1 | Wheat | plastid | 75.78 | 74.23 |
| CDY64844 | Canola | cytosol | 75.0 | 74.04 |
| Solyc03g005390.2.1 | Tomato | cytosol, peroxisome, vacuole | 75.26 | 73.16 |
| TraesCS5B01G386300.1 | Wheat | plastid | 73.44 | 72.68 |
| CDX88569 | Canola | cytosol, peroxisome, plasma membrane | 46.88 | 43.9 |
| CDX87352 | Canola | cytosol, peroxisome, plasma membrane | 46.35 | 43.41 |
| CDY35061 | Canola | plastid | 45.05 | 41.19 |
| CDX99295 | Canola | cytosol, mitochondrion, nucleus, plastid | 44.53 | 40.81 |
| CDX92290 | Canola | cytosol, mitochondrion, nucleus, plastid | 44.53 | 40.71 |
| CDY65607 | Canola | plastid | 45.31 | 40.56 |
| CDY49260 | Canola | plastid | 45.05 | 40.33 |
| CDY22292 | Canola | plastid | 42.19 | 40.0 |
| CDY49735 | Canola | mitochondrion, peroxisome, plasma membrane, plastid | 42.19 | 39.9 |
| CDY33715 | Canola | cytosol | 38.54 | 39.89 |
| CDY33361 | Canola | plastid | 42.97 | 39.47 |
| CDY66275 | Canola | cytosol, peroxisome, plasma membrane | 44.53 | 38.78 |
| CDY39718 | Canola | cytosol | 37.76 | 38.36 |
| CDY02984 | Canola | cytosol, peroxisome, plasma membrane | 41.93 | 38.24 |
| CDY36615 | Canola | cytosol, nucleus, peroxisome | 41.93 | 38.24 |
| CDY51207 | Canola | cytosol, nucleus, peroxisome | 41.67 | 38.0 |
| CDX95430 | Canola | cytosol, golgi, peroxisome | 41.67 | 35.16 |
| CDY42196 | Canola | cytosol | 40.89 | 34.43 |
| CDY58861 | Canola | nucleus | 44.79 | 23.56 |
| CDY26960 | Canola | plastid | 23.44 | 19.65 |
| CDX92333 | Canola | plastid | 23.44 | 19.35 |
Protein Annotations
| Gene3D:2.40.128.330 | MapMan:24.3.3.1 | GO:A0A078G096 | UniProt:A0A078G096 | EnsemblPlants:CDY18706 | ProteinID:CDY18706 |
| ProteinID:CDY18706.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00005789001 | InterPro:MgTranspt_CorA/ZnTranspt_ZntB | PFAM:PF01544 | PANTHER:PTHR13890 | PANTHER:PTHR13890:SF8 | SUPFAM:SSF144083 |
| TMHMM:TMhelix | UniParc:UPI0004EF0E8F | SEG:seg | : | : | : |
Description
BnaA09g06890DBnaA09g06890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G096]
Coordinates
chrLK032087:+:635099..638019
Molecular Weight (calculated)
43122.1 Da
IEP (calculated)
4.801
GRAVY (calculated)
-0.241
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHNSVNVVA TKTKPQSSRS WVSIVATGES EALDVDKYAI MHRVQIHARD LRILDPNLSY PSTILGRERA IVLNLEHIKA IITSEEVLLR DPSDEHVIPV
101: VKELERRLPV GNEEHHGQGD GKESSNAHND ADAGEEDESP FEFRALEVFL EAICSFLAAR TTELETAAYP ALDELTSKIS SRNLDRVRKL KSAMTRLTAR
201: VQKVRDELEQ LLDDDDDMAD LYLSRKLFSA SSASTSPNYY LTSPTIGSKI SRASRASLAT VRGDENDVEE LEMLLEAYFM QIDSTLNRLT TLREYIDDTE
301: DYINIQLDNH RNQLIQLELV LSSGTVCSSF YSLVAGIFGM NIPYTWNNDH GYMFKYVVIG TGMCCVILFV FIMSHARYKG LVGS
101: VKELERRLPV GNEEHHGQGD GKESSNAHND ADAGEEDESP FEFRALEVFL EAICSFLAAR TTELETAAYP ALDELTSKIS SRNLDRVRKL KSAMTRLTAR
201: VQKVRDELEQ LLDDDDDMAD LYLSRKLFSA SSASTSPNYY LTSPTIGSKI SRASRASLAT VRGDENDVEE LEMLLEAYFM QIDSTLNRLT TLREYIDDTE
301: DYINIQLDNH RNQLIQLELV LSSGTVCSSF YSLVAGIFGM NIPYTWNNDH GYMFKYVVIG TGMCCVILFV FIMSHARYKG LVGS
001: MAQNGYLVPA DPSAVVTVKK KTPQASWALI DATGQSEPLD VDKYEIMHRV QIHARDLRIL DPNLSYPSTI LGRERAIVLN LEHIKAIITS EEVLLRDPSD
101: ENVIPVVEEL RRRLPVGNAS HNGGQGDGKE IAGAQNDGDT GDEDESPFEF RALEVALEAI CSFLAARTAE LETAAYPALD ELTSKISSRN LDRVRKLKSA
201: MTRLTARVQK VRDELEQLLD DDDDMADLYL SRKLSSASSP ISSIGEPNWY TTSPTIGSKI SRASRASLAT VHGDENDVEE LEMLLEAYFM QIDSTLNRLT
301: TLREYIDDTE DYINIQLDNH RNQLIQLELV LSSGTVCLSM YSLVAGIFGM NIPYTWNDGH GYMFKYVVGL TGTLCVVVFV IIMSYARYKG LVGS
101: ENVIPVVEEL RRRLPVGNAS HNGGQGDGKE IAGAQNDGDT GDEDESPFEF RALEVALEAI CSFLAARTAE LETAAYPALD ELTSKISSRN LDRVRKLKSA
201: MTRLTARVQK VRDELEQLLD DDDDMADLYL SRKLSSASSP ISSIGEPNWY TTSPTIGSKI SRASRASLAT VHGDENDVEE LEMLLEAYFM QIDSTLNRLT
301: TLREYIDDTE DYINIQLDNH RNQLIQLELV LSSGTVCLSM YSLVAGIFGM NIPYTWNDGH GYMFKYVVGL TGTLCVVVFV IIMSYARYKG LVGS
Arabidopsis Description
MRS2-2Magnesium transporter MRS2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.