CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007423.1-P	Field mustard	plastid	99.53	99.53
CDY65607	Canola	plastid	98.6	98.6
AT3G58970.1	Thale cress	mitochondrion, plastid	88.11	86.7
CDX92290	Canola	cytosol, mitochondrion, nucleus, plastid	78.09	79.76
CDX99295	Canola	cytosol, mitochondrion, nucleus, plastid	77.39	79.24
VIT_12s0034g02550.t01	Wine grape	plastid	71.1	67.33
GSMUA_Achr4P29320_001	Banana	cytosol, peroxisome, plasma membrane	57.81	65.44
Solyc01g103890.2.1	Tomato	nucleus	65.03	64.58
PGSC0003DMT400064171	Potato	nucleus	65.03	64.58
KRH59146	Soybean	plastid	66.43	63.19
KRH43038	Soybean	plastid	65.5	62.44
CDY33715	Canola	cytosol	51.52	59.57
CDY39718	Canola	cytosol	51.75	58.73
TraesCS1B01G219000.1	Wheat	mitochondrion	61.54	56.41
TraesCS1D01G208700.1	Wheat	mitochondrion	60.61	55.91
TraesCS1A01G205400.1	Wheat	mitochondrion	59.91	55.39
HORVU1Hr1G052760.2	Barley	mitochondrion, plastid	61.07	54.7
Zm00001d047388_P001	Maize	mitochondrion, plastid	60.37	54.41
Zm00001d029808_P001	Maize	mitochondrion, plastid	59.91	53.99
EER91996	Sorghum	mitochondrion	60.14	53.97
OQU93276	Sorghum	plastid	47.32	46.99
CDX81228	Canola	cytosol, mitochondrion, plastid	40.33	46.76
CDY64845	Canola	mitochondrion, peroxisome, plastid	39.39	46.17
Zm00001d027582_P001	Maize	plastid	46.85	45.89
CDY51292	Canola	cytosol, peroxisome, plastid	40.33	45.77
CDY56489	Canola	cytosol, peroxisome, plastid	40.33	45.77
CDY64844	Canola	cytosol	41.26	45.5
CDY18706	Canola	cytosol, mitochondrion, plastid	40.33	45.05
CDX85800	Canola	cytosol	40.79	44.99
Os03t0137700-01	Rice	plastid	44.52	43.91
CDY46811	Canola	cytosol	37.76	43.2
CDY31314	Canola	cytosol	37.53	41.93
CDX88569	Canola	cytosol, peroxisome, plasma membrane	35.9	37.56
CDX87352	Canola	cytosol, peroxisome, plasma membrane	35.43	37.07
CDY35061	Canola	plastid	35.43	36.19
CDY66275	Canola	cytosol, peroxisome, plasma membrane	37.06	36.05
CDY33361	Canola	plastid	34.27	35.17
CDY22292	Canola	plastid	33.1	35.06
CDY49735	Canola	mitochondrion, peroxisome, plasma membrane, plastid	33.1	34.98
CDY36615	Canola	cytosol, nucleus, peroxisome	34.27	34.92
CDY02984	Canola	cytosol, peroxisome, plasma membrane	34.27	34.92
CDY51207	Canola	cytosol, nucleus, peroxisome	34.03	34.68
CDX95430	Canola	cytosol, golgi, peroxisome	34.03	32.09
CDY42196	Canola	cytosol	33.8	31.8
CDY58861	Canola	nucleus	36.6	21.51
CDY26960	Canola	plastid	18.88	17.69
CDX92333	Canola	plastid	19.11	17.63

Protein Annotations

Gene3D:1.20.58.340	Gene3D:2.40.128.330	MapMan:24.3.3.1	GO:A0A078IEG9	UniProt:A0A078IEG9	EnsemblPlants:CDY49260
ProteinID:CDY49260	ProteinID:CDY49260.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00092654001	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544	PANTHER:PTHR13890	PANTHER:PTHR13890:SF2
SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI0004EEA826	SEG:seg	:	:

Description

BnaA09g55390DBnaA09g55390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEG9]

Coordinates

chrLK032820:-:118080..120135

Molecular Weight (calculated)

48180.0 Da

IEP (calculated)

4.931

GRAVY (calculated)

-0.167

Length

429 amino acids

Sequence
(BLAST)

001: MGKGPLSFRR LSSIRRRKKG SSVKDDPNQS SNPSSPPPPS PINAGGSVAA GTTGKVKKKA GGARLWMRFD RTGAMEVVEC DKSTIIKRSS VPARDLRILG
101: PVFSHSSNIL AREKAIVVNL EVIKAIVTAE EVLLLDPLRP EVLPFIDRLK QQFPQRNALE ATPNVQTFDP EAGEGLQSEL PFEFQVLEMA LEVVCSIVDT
201: SVASLETDAW PVLDELTKNV STENLEYVRS LKSNLTRLLA RVQKVRDELE HLLDDNEDMA DLYLTRKWNQ NQQAEALLEG TVSVAPPHNT SNLYRLTSNR
301: SASMVTSNMD EDDVEDLEML LEAYFMQLEG MRNKILTVRE YIDDTEDYVN IQLDNQRNQL IQLQLILTMA SFAITAETLL ASLFGMNIPC PLYNINGIFW
401: YFVWSITAFC FVLFMVVLGY ARWKKLLGS

Best Arabidopsis Sequence Match ( AT3G58970.1 )
(BLAST)

001: MGKGPLSFRR LSSIRHRKKG SAVKDDSAQT STPSSPPPPL PIHAGGSAVG ATGKAKKKTG GARLWMRFDR TGAMEVVECD KSTIIKRASV PARDLRILGP
101: VFSHSSNILA REKAIVVNLE VIKAIVTAEE VLLLDPLRPE VLPFVERLKQ QFPQRNGNEN ALQASANVQS PLDPEAAEGL QSELPFEFQV LEIALEVVCS
201: FVDKSVAALE TEAWPVLDEL TKNVSTENLE YVRSLKSNLT RLLARVQKVR DELEHLLDDN EDMADLYLTR KWIQNQQTEA ILAGTASNSI ALPAHNTSNL
301: HRLTSNRSAS MVTSNTEEDD VEDLEMLLEA YFMQLDGMRN KILTVREYID DTEDYVNIQL DNQRNELIQL QLTLTIASFA IAAETLLASL FGMNIPCPLY
401: SIHGVFGYFV WSVTALCIVL FMVTLGYARW KKLLGS

Arabidopsis Description

MRS2-4MRS2-4 [Source:UniProtKB/TrEMBL;Acc:A0A178VB54]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.