Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51292 | Canola | cytosol, peroxisome, plastid | 99.21 | 99.21 |
| Bra024309.1-P | Field mustard | cytosol, peroxisome, plastid | 98.15 | 94.64 |
| CDX81228 | Canola | cytosol, mitochondrion, plastid | 90.74 | 92.7 |
| CDY18706 | Canola | cytosol, mitochondrion, plastid | 91.01 | 89.58 |
| Os03t0742400-01 | Rice | plasma membrane | 53.97 | 81.93 |
| CDY46811 | Canola | cytosol | 81.22 | 81.87 |
| AT5G64560.1 | Thale cress | cytosol | 85.19 | 81.73 |
| CDY31314 | Canola | cytosol | 81.75 | 80.47 |
| VIT_05s0020g04720.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 79.63 | 77.38 |
| CDX85800 | Canola | cytosol | 78.31 | 76.09 |
| CDY64845 | Canola | mitochondrion, peroxisome, plastid | 73.28 | 75.68 |
| KRG92427 | Soybean | cytosol, peroxisome, plasma membrane | 78.57 | 75.19 |
| KRH34378 | Soybean | cytosol, peroxisome, plastid | 77.51 | 75.13 |
| CDY64844 | Canola | cytosol | 77.25 | 75.06 |
| EER90897 | Sorghum | cytosol | 76.72 | 74.94 |
| TraesCS5D01G391700.1 | Wheat | plastid | 75.4 | 73.45 |
| HORVU5Hr1G094250.1 | Barley | plastid | 75.13 | 73.2 |
| TraesCS5A01G382400.1 | Wheat | plastid | 75.13 | 72.45 |
| Solyc03g005390.2.1 | Tomato | cytosol, peroxisome, vacuole | 75.4 | 72.15 |
| TraesCS5B01G386300.1 | Wheat | plastid | 73.02 | 71.13 |
| CDX88569 | Canola | cytosol, peroxisome, plasma membrane | 48.41 | 44.63 |
| CDX87352 | Canola | cytosol, peroxisome, plasma membrane | 47.88 | 44.15 |
| CDY35061 | Canola | plastid | 46.56 | 41.9 |
| CDY22292 | Canola | plastid | 44.44 | 41.48 |
| CDY49735 | Canola | mitochondrion, peroxisome, plasma membrane, plastid | 44.44 | 41.38 |
| CDX99295 | Canola | cytosol, mitochondrion, nucleus, plastid | 44.97 | 40.57 |
| CDX92290 | Canola | cytosol, mitochondrion, nucleus, plastid | 44.97 | 40.48 |
| CDY33361 | Canola | plastid | 44.71 | 40.43 |
| CDY49260 | Canola | plastid | 45.77 | 40.33 |
| CDY65607 | Canola | plastid | 45.77 | 40.33 |
| CDY33715 | Canola | cytosol | 39.15 | 39.89 |
| CDY66275 | Canola | cytosol, peroxisome, plasma membrane | 45.24 | 38.78 |
| CDY02984 | Canola | cytosol, peroxisome, plasma membrane | 43.12 | 38.72 |
| CDY36615 | Canola | cytosol, nucleus, peroxisome | 43.12 | 38.72 |
| CDY39718 | Canola | cytosol | 38.62 | 38.62 |
| CDY51207 | Canola | cytosol, nucleus, peroxisome | 42.86 | 38.48 |
| CDX95430 | Canola | cytosol, golgi, peroxisome | 41.53 | 34.51 |
| CDY42196 | Canola | cytosol | 40.74 | 33.77 |
| CDY58861 | Canola | nucleus | 45.5 | 23.56 |
| CDY26960 | Canola | plastid | 24.07 | 19.87 |
| CDX92333 | Canola | plastid | 24.07 | 19.57 |
Protein Annotations
| Gene3D:2.40.128.330 | MapMan:24.3.3.1 | GO:A0A078J2S2 | UniProt:A0A078J2S2 | EnsemblPlants:CDY56489 | ProteinID:CDY56489 |
| ProteinID:CDY56489.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00019635001 | InterPro:MgTranspt_CorA/ZnTranspt_ZntB | PFAM:PF01544 | PANTHER:PTHR13890 | PANTHER:PTHR13890:SF8 | SUPFAM:SSF144083 |
| TMHMM:TMhelix | UniParc:UPI0004EDD57B | SEG:seg | : | : | : |
Description
BnaCnng30470DBnaCnng30470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2S2]
Coordinates
chrLK033493:+:40966..43321
Molecular Weight (calculated)
42150.0 Da
IEP (calculated)
4.655
GRAVY (calculated)
-0.178
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYNNNGNAV AAADPLPGKK TKLQSSRSWV SIVATGESET LDVDKYAIMH RVQIHARDLR ILDPNLSYPS TILGRERAVV LNLEHIKAII TADEVLLRDP
101: SDENVIPVLK ELERRLPSSA AQNDADAGEE DDSPFEFRAL EVFLEAICSF LAARTTELET AAYPALDELT SKISSRNLDR VRKLKSAMTR LTARVQKVRD
201: ELEQLLDDDD DMADLYLSRK LSSASSASSS PNCYLTSPTI GSKISRASRA SLATARGDEN DVEELEMLLE AYFMQIDSTL NRLTTLREYI DDTEDYINIQ
301: LDNHRNQLIQ LELVLSSGTV CSAFYSLVAG IFGMNIPYTW NDNHGYMFKY VVILTGAICV ILFTFIMSHA RYKGLVGS
101: SDENVIPVLK ELERRLPSSA AQNDADAGEE DDSPFEFRAL EVFLEAICSF LAARTTELET AAYPALDELT SKISSRNLDR VRKLKSAMTR LTARVQKVRD
201: ELEQLLDDDD DMADLYLSRK LSSASSASSS PNCYLTSPTI GSKISRASRA SLATARGDEN DVEELEMLLE AYFMQIDSTL NRLTTLREYI DDTEDYINIQ
301: LDNHRNQLIQ LELVLSSGTV CSAFYSLVAG IFGMNIPYTW NDNHGYMFKY VVILTGAICV ILFTFIMSHA RYKGLVGS
001: MAQNGYLVPA DPSAVVTVKK KTPQASWALI DATGQSEPLD VDKYEIMHRV QIHARDLRIL DPNLSYPSTI LGRERAIVLN LEHIKAIITS EEVLLRDPSD
101: ENVIPVVEEL RRRLPVGNAS HNGGQGDGKE IAGAQNDGDT GDEDESPFEF RALEVALEAI CSFLAARTAE LETAAYPALD ELTSKISSRN LDRVRKLKSA
201: MTRLTARVQK VRDELEQLLD DDDDMADLYL SRKLSSASSP ISSIGEPNWY TTSPTIGSKI SRASRASLAT VHGDENDVEE LEMLLEAYFM QIDSTLNRLT
301: TLREYIDDTE DYINIQLDNH RNQLIQLELV LSSGTVCLSM YSLVAGIFGM NIPYTWNDGH GYMFKYVVGL TGTLCVVVFV IIMSYARYKG LVGS
101: ENVIPVVEEL RRRLPVGNAS HNGGQGDGKE IAGAQNDGDT GDEDESPFEF RALEVALEAI CSFLAARTAE LETAAYPALD ELTSKISSRN LDRVRKLKSA
201: MTRLTARVQK VRDELEQLLD DDDDMADLYL SRKLSSASSP ISSIGEPNWY TTSPTIGSKI SRASRASLAT VHGDENDVEE LEMLLEAYFM QIDSTLNRLT
301: TLREYIDDTE DYINIQLDNH RNQLIQLELV LSSGTVCLSM YSLVAGIFGM NIPYTWNDGH GYMFKYVVGL TGTLCVVVFV IIMSYARYKG LVGS
Arabidopsis Description
MRS2-2Magnesium transporter MRS2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.