CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

nucleus 1
mitochondrion 3
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85800	Canola	cytosol	90.16	84.83
CDY64844	Canola	cytosol	88.8	83.55
AT5G09690.2	Thale cress	cytosol	84.15	77.58
Os03t0742400-01	Rice	plasma membrane	52.46	77.11
CDX81228	Canola	cytosol, mitochondrion, plastid	75.96	75.14
CDY56489	Canola	cytosol, peroxisome, plastid	75.68	73.28
CDY18706	Canola	cytosol, mitochondrion, plastid	76.5	72.92
CDY51292	Canola	cytosol, peroxisome, plastid	75.14	72.75
VIT_05s0020g04720.t01	Wine grape	cytosol, peroxisome, plasma membrane	76.5	71.98
HORVU5Hr1G094250.1	Barley	plastid	74.32	70.1
EER90897	Sorghum	cytosol	74.04	70.03
TraesCS5D01G391700.1	Wheat	plastid	74.04	69.85
KRG92427	Soybean	cytosol, peroxisome, plasma membrane	74.86	69.37
KRH34378	Soybean	cytosol, peroxisome, plastid	73.77	69.23
TraesCS5A01G382400.1	Wheat	plastid	73.77	68.88
Solyc03g005390.2.1	Tomato	cytosol, peroxisome, vacuole	74.04	68.61
CDY46811	Canola	cytosol	69.4	67.73
TraesCS5B01G386300.1	Wheat	plastid	71.58	67.53
AT5G09720.2	Thale cress	cytosol	52.46	65.31
CDY31314	Canola	cytosol	68.31	65.1
CDX88569	Canola	cytosol, peroxisome, plasma membrane	48.91	43.66
CDX87352	Canola	cytosol, peroxisome, plasma membrane	48.09	42.93
CDY22292	Canola	plastid	44.81	40.49
CDY49735	Canola	mitochondrion, peroxisome, plasma membrane, plastid	44.81	40.39
CDY35061	Canola	plastid	46.17	40.24
CDX99295	Canola	cytosol, mitochondrion, nucleus, plastid	45.63	39.86
CDX92290	Canola	cytosol, mitochondrion, nucleus, plastid	45.63	39.76
CDY65607	Canola	plastid	46.45	39.63
CDY49260	Canola	plastid	46.17	39.39
CDY33361	Canola	plastid	44.26	38.76
CDY66275	Canola	cytosol, peroxisome, plasma membrane	45.36	37.64
CDY02984	Canola	cytosol, peroxisome, plasma membrane	42.35	36.82
CDY51207	Canola	cytosol, nucleus, peroxisome	42.35	36.82
CDY36615	Canola	cytosol, nucleus, peroxisome	42.35	36.82
CDY33715	Canola	cytosol	36.89	36.39
CDY39718	Canola	cytosol	37.43	36.24
CDX95430	Canola	cytosol, golgi, peroxisome	43.44	34.95
CDY42196	Canola	cytosol	42.9	34.43
CDY58861	Canola	nucleus	45.63	22.88
CDY26960	Canola	plastid	23.77	19.0
CDX92333	Canola	plastid	24.04	18.92

Protein Annotations

EnsemblPlants:CDY64845	EnsemblPlantsGene:GSBRNA2T00042835001	Gene3D:2.40.128.330	GO:A0A078JEJ0	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	ncoils:Coil	PANTHER:PTHR13890	PANTHER:PTHR13890:SF8	ProteinID:CDY64845	ProteinID:CDY64845.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EAB344	UniProt:A0A078JEJ0	MapMan:24.3.3.1	:

Description

BnaCnng45330DBnaCnng45330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEJ0]

Coordinates

chrLK034568:-:7785..9999

Molecular Weight (calculated)

41658.0 Da

IEP (calculated)

4.501

GRAVY (calculated)

-0.088

Length

366 amino acids

Sequence
(BLAST)

001: MVAEGVVTVK RQTPLSSRSW ISIDATGKRT VLDEDKYAIM QRVQIHARDL RILDPNLCYP STILGRERAI VVNLEHIKAI ITSQEVLIRD SSDVNLIPVL
101: EEFQRRLPVV QGDAEAGEED ESPFEFRALE VALEAICSLL AARTMELETS AYPALDELTS KISSRNLERV RKLKSAMTRL TARVQKVRDE LEQLLDDDDD
201: MADIYLSRKL ADVSSSINVS NEPLWYPTSP TIGSKFSRAS RMSWDDEIDV EELEMLLEAY FMQIDNTLNK LTALHEYIDD TEDYINIQLD NHRNQLIQLE
301: LMLSSGTICV SMYSMIAGIF GMRIPNTWNE DHGYVFKWVV SLTGTFCVVL FVIILSYARF KGLVGF

Best Arabidopsis Sequence Match ( AT5G09690.2 )
(BLAST)

001: MALGLSSEES EMSPDGELVP VDSSAVVTAK RKTSQLSRSW ISIDATGQKT VLDVDKHVIM HRVQIHARDL RILDPNLFYP SAILGRERAI VLNLEHIKAI
101: ITAEEVLIRD SSDENVIPVL EEFQRRLPVG NEAHGVHGDG DLGEEDESPF EFRALEVALE AICSFLAART TELEKFAYPA LDELTLKISS RNLERVRKLK
201: SAMTRLTARV QKVRDELEQL LDDDGDMADL YLTRKLVGAS SSVSVSDEPI WYPTSPTIGS MISRASRVSL VTVRGDDETD VEELEMLLEA YFMQIDSTLN
301: KLTELREYID DTEDYINIQL DNHRNQLIQL ELMLSAGTVC VSVYSMIAGI FGMNIPNTWN HDHGYIFKWV VSLTGTFCIV LFVIILSYAR FRGLIGS

Arabidopsis Description

ATMGT7magnesium transporter 7 [Source:TAIR;Acc:AT5G09690]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.