Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028621.1-P | Field mustard | cytosol | 97.69 | 97.69 |
| CDX85800 | Canola | cytosol | 97.69 | 97.69 |
| CDY64845 | Canola | mitochondrion, peroxisome, plastid | 83.55 | 88.8 |
| AT5G09690.2 | Thale cress | cytosol | 84.06 | 82.37 |
| Os03t0742400-01 | Rice | plasma membrane | 52.44 | 81.93 |
| CDX81228 | Canola | cytosol, mitochondrion, plastid | 73.52 | 77.3 |
| CDY56489 | Canola | cytosol, peroxisome, plastid | 75.06 | 77.25 |
| CDY51292 | Canola | cytosol, peroxisome, plastid | 74.81 | 76.98 |
| VIT_05s0020g04720.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 76.35 | 76.35 |
| CDY18706 | Canola | cytosol, mitochondrion, plastid | 74.04 | 75.0 |
| KRG92427 | Soybean | cytosol, peroxisome, plasma membrane | 74.55 | 73.42 |
| KRH34378 | Soybean | cytosol, peroxisome, plastid | 73.52 | 73.33 |
| Solyc03g005390.2.1 | Tomato | cytosol, peroxisome, vacuole | 74.29 | 73.16 |
| EER90897 | Sorghum | cytosol | 72.75 | 73.13 |
| TraesCS5D01G391700.1 | Wheat | plastid | 72.49 | 72.68 |
| HORVU5Hr1G094250.1 | Barley | plastid | 72.49 | 72.68 |
| TraesCS5A01G382400.1 | Wheat | plastid | 72.24 | 71.68 |
| CDY46811 | Canola | cytosol | 68.12 | 70.67 |
| TraesCS5B01G386300.1 | Wheat | plastid | 69.92 | 70.1 |
| AT5G09720.2 | Thale cress | cytosol | 51.93 | 68.71 |
| CDY31314 | Canola | cytosol | 67.35 | 68.23 |
| CDX88569 | Canola | cytosol, peroxisome, plasma membrane | 46.53 | 44.15 |
| CDX87352 | Canola | cytosol, peroxisome, plasma membrane | 46.27 | 43.9 |
| CDY35061 | Canola | plastid | 44.99 | 41.67 |
| CDY65607 | Canola | plastid | 45.76 | 41.49 |
| CDY22292 | Canola | plastid | 43.19 | 41.48 |
| CDY49735 | Canola | mitochondrion, peroxisome, plasma membrane, plastid | 43.19 | 41.38 |
| CDY49260 | Canola | plastid | 45.5 | 41.26 |
| CDX99295 | Canola | cytosol, mitochondrion, nucleus, plastid | 44.22 | 41.05 |
| CDX92290 | Canola | cytosol, mitochondrion, nucleus, plastid | 43.96 | 40.71 |
| CDY33361 | Canola | plastid | 43.19 | 40.19 |
| CDY66275 | Canola | cytosol, peroxisome, plasma membrane | 44.73 | 39.46 |
| CDY33715 | Canola | cytosol | 36.76 | 38.54 |
| CDY39718 | Canola | cytosol | 37.28 | 38.36 |
| CDY51207 | Canola | cytosol, nucleus, peroxisome | 41.39 | 38.24 |
| CDY02984 | Canola | cytosol, peroxisome, plasma membrane | 41.13 | 38.0 |
| CDY36615 | Canola | cytosol, nucleus, peroxisome | 41.13 | 38.0 |
| CDX95430 | Canola | cytosol, golgi, peroxisome | 42.16 | 36.04 |
| CDY42196 | Canola | cytosol | 41.65 | 35.53 |
| CDY58861 | Canola | nucleus | 44.73 | 23.84 |
| CDY26960 | Canola | plastid | 21.59 | 18.34 |
| CDX92333 | Canola | plastid | 21.59 | 18.06 |
Protein Annotations
| Gene3D:1.20.58.340 | Gene3D:2.40.128.330 | MapMan:24.3.3.1 | GO:A0A078JDU4 | UniProt:A0A078JDU4 | EnsemblPlants:CDY64844 |
| ProteinID:CDY64844 | ProteinID:CDY64844.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00042834001 | InterPro:MgTranspt_CorA/ZnTranspt_ZntB | PFAM:PF01544 | PANTHER:PTHR13890 | PANTHER:PTHR13890:SF8 |
| SUPFAM:SSF144083 | TMHMM:TMhelix | UniParc:UPI0004EC0036 | SEG:seg | : | : |
Description
BnaCnng45320DBnaCnng45320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDU4]
Coordinates
chrLK034568:-:5099..7397
Molecular Weight (calculated)
43935.3 Da
IEP (calculated)
4.547
GRAVY (calculated)
-0.242
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPDGESATV DPSTVVTVKR KTTKPSRSWT SIDTTGKRTV LDEDKYAIMH RVQIHARDLR ILDPNLSYPS AILGRERAIV LNLEHIKAII TAQEVLVRDS
101: SDENLVPVLE EFQRRLPVVQ GDAEAGEEDE SPFEFRALEV VLEAICSVLA ARTTELETSA YPALDELTSK ISSRNLERVR KLKSAMTRLT ARVQKVRDEL
201: EQLLDDDDDM ADIYLTRKLA GVSSSVSVSD EPLWYPTSPT IGSKISRASR MSLVSVRGDD ENDVEELEML LEAYFMQIDS TLNKLTALRE YIDDTEDYIN
301: IQLDNHRNQL IQLELMLSSG TVCISMYSMI AGIFGMNIPY TWNDEHGYVF KWVVSLTGTF CAALFVIVLS YARYKGLVGS WWSKENKQD
101: SDENLVPVLE EFQRRLPVVQ GDAEAGEEDE SPFEFRALEV VLEAICSVLA ARTTELETSA YPALDELTSK ISSRNLERVR KLKSAMTRLT ARVQKVRDEL
201: EQLLDDDDDM ADIYLTRKLA GVSSSVSVSD EPLWYPTSPT IGSKISRASR MSLVSVRGDD ENDVEELEML LEAYFMQIDS TLNKLTALRE YIDDTEDYIN
301: IQLDNHRNQL IQLELMLSSG TVCISMYSMI AGIFGMNIPY TWNDEHGYVF KWVVSLTGTF CAALFVIVLS YARYKGLVGS WWSKENKQD
001: MALGLSSEES EMSPDGELVP VDSSAVVTAK RKTSQLSRSW ISIDATGQKT VLDVDKHVIM HRVQIHARDL RILDPNLFYP SAILGRERAI VLNLEHIKAI
101: ITAEEVLIRD SSDENVIPVL EEFQRRLPVG NEAHGVHGDG DLGEEDESPF EFRALEVALE AICSFLAART TELEKFAYPA LDELTLKISS RNLERVRKLK
201: SAMTRLTARV QKVRDELEQL LDDDGDMADL YLTRKLVGAS SSVSVSDEPI WYPTSPTIGS MISRASRVSL VTVRGDDETD VEELEMLLEA YFMQIDSTLN
301: KLTELREYID DTEDYINIQL DNHRNQLIQL ELMLSAGTVC VSVYSMIAGI FGMNIPNTWN HDHGYIFKWV VSLTGTFCIV LFVIILSYAR FRGLIGS
101: ITAEEVLIRD SSDENVIPVL EEFQRRLPVG NEAHGVHGDG DLGEEDESPF EFRALEVALE AICSFLAART TELEKFAYPA LDELTLKISS RNLERVRKLK
201: SAMTRLTARV QKVRDELEQL LDDDGDMADL YLTRKLVGAS SSVSVSDEPI WYPTSPTIGS MISRASRVSL VTVRGDDETD VEELEMLLEA YFMQIDSTLN
301: KLTELREYID DTEDYINIQL DNHRNQLIQL ELMLSAGTVC VSVYSMIAGI FGMNIPNTWN HDHGYIFKWV VSLTGTFCIV LFVIILSYAR FRGLIGS
Arabidopsis Description
ATMGT7magnesium transporter 7 [Source:TAIR;Acc:AT5G09690]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.