Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- mitochondrion 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42196 | Canola | cytosol | 96.26 | 96.05 |
| Bra038223.1-P | Field mustard | cytosol, golgi, peroxisome | 96.26 | 95.22 |
| CDY66275 | Canola | cytosol, peroxisome, plasma membrane | 75.16 | 77.55 |
| AT3G19640.1 | Thale cress | cytosol, golgi, peroxisome, plastid | 78.46 | 73.76 |
| KRH77919 | Soybean | cytosol | 58.46 | 67.68 |
| KRH27585 | Soybean | cytosol | 57.36 | 65.41 |
| Solyc01g106900.2.1 | Tomato | cytosol, peroxisome, plastid | 64.4 | 58.84 |
| PGSC0003DMT400066130 | Potato | cytosol, peroxisome, plastid | 63.96 | 58.43 |
| VIT_03s0091g01190.t01 | Wine grape | cytosol | 64.18 | 58.28 |
| OQU81611 | Sorghum | peroxisome, plasma membrane, plastid | 14.51 | 51.97 |
| Zm00001d012102_P001 | Maize | mitochondrion | 50.11 | 51.47 |
| EES04071 | Sorghum | mitochondrion | 49.45 | 50.79 |
| Zm00001d042441_P001 | Maize | mitochondrion | 49.23 | 50.56 |
| TraesCS3B01G448800.1 | Wheat | mitochondrion | 49.89 | 50.56 |
| TraesCS3A01G414000.1 | Wheat | mitochondrion | 49.89 | 50.33 |
| TraesCS3D01G408500.1 | Wheat | mitochondrion | 49.67 | 50.22 |
| GSMUA_Achr5P01890_001 | Banana | nucleus | 54.51 | 50.1 |
| HORVU3Hr1G092200.1 | Barley | mitochondrion | 49.23 | 50.0 |
| Os01t0908500-01 | Rice | plasma membrane | 48.35 | 49.55 |
| TraesCS3A01G380600.1 | Wheat | mitochondrion | 43.52 | 48.89 |
| TraesCS3B01G413200.1 | Wheat | mitochondrion | 43.52 | 48.89 |
| TraesCS3D01G373700.1 | Wheat | mitochondrion | 43.3 | 48.64 |
| KXG25477 | Sorghum | plastid | 38.24 | 48.47 |
| HORVU3Hr1G082870.5 | Barley | mitochondrion | 43.08 | 48.28 |
| TraesCS3B01G413100.1 | Wheat | cytosol, nucleus, plastid, vacuole | 42.64 | 47.67 |
| TraesCS3D01G373600.1 | Wheat | mitochondrion | 42.42 | 47.42 |
| CDY58861 | Canola | nucleus | 76.04 | 47.4 |
| CDX87352 | Canola | cytosol, peroxisome, plasma membrane | 42.42 | 47.07 |
| CDX88569 | Canola | cytosol, peroxisome, plasma membrane | 42.2 | 46.83 |
| TraesCS3A01G380500.1 | Wheat | mitochondrion | 41.76 | 46.57 |
| Zm00001d003666_P001 | Maize | mitochondrion | 41.1 | 46.4 |
| KXG34188 | Sorghum | plasma membrane | 14.95 | 45.95 |
| EES01822 | Sorghum | mitochondrion | 41.76 | 45.89 |
| Os01t0869200-01 | Rice | mitochondrion, plastid | 41.98 | 45.69 |
| HORVU3Hr1G082880.2 | Barley | cytosol, mitochondrion, peroxisome, vacuole | 41.76 | 45.35 |
| EES10822 | Sorghum | mitochondrion | 41.54 | 44.89 |
| Os04t0430900-00 | Rice | cytosol, plastid | 41.32 | 44.13 |
| Zm00001d025416_P001 | Maize | mitochondrion | 38.46 | 43.97 |
| CDY22292 | Canola | plastid | 39.12 | 43.95 |
| CDY49735 | Canola | mitochondrion, peroxisome, plasma membrane, plastid | 39.12 | 43.84 |
| CDY64845 | Canola | mitochondrion, peroxisome, plastid | 34.95 | 43.44 |
| CDY35061 | Canola | plastid | 40.0 | 43.33 |
| CDX81228 | Canola | cytosol, mitochondrion, plastid | 35.16 | 43.24 |
| CDY33361 | Canola | plastid | 38.9 | 42.34 |
| CDY64844 | Canola | cytosol | 36.04 | 42.16 |
| CDX85800 | Canola | cytosol | 35.82 | 41.9 |
| CDY18706 | Canola | cytosol, mitochondrion, plastid | 35.16 | 41.67 |
| CDY56489 | Canola | cytosol, peroxisome, plastid | 34.51 | 41.53 |
| CDY51292 | Canola | cytosol, peroxisome, plastid | 34.51 | 41.53 |
| CDY51207 | Canola | cytosol, nucleus, peroxisome | 37.58 | 40.62 |
| CDY02984 | Canola | cytosol, peroxisome, plasma membrane | 37.36 | 40.38 |
| CDY36615 | Canola | cytosol, nucleus, peroxisome | 37.36 | 40.38 |
| CDY46811 | Canola | cytosol | 33.19 | 40.27 |
| CDY31314 | Canola | cytosol | 32.97 | 39.06 |
| CDY33715 | Canola | cytosol | 29.23 | 35.85 |
| CDY39718 | Canola | cytosol | 29.23 | 35.19 |
| CDX99295 | Canola | cytosol, mitochondrion, nucleus, plastid | 31.87 | 34.61 |
| CDX92290 | Canola | cytosol, mitochondrion, nucleus, plastid | 31.87 | 34.52 |
| CDY65607 | Canola | plastid | 32.31 | 34.27 |
| CDY49260 | Canola | plastid | 32.09 | 34.03 |
| CDY26960 | Canola | plastid | 17.58 | 17.47 |
| CDX92333 | Canola | plastid | 17.36 | 16.99 |
Protein Annotations
| EnsemblPlants:CDX95430 | EnsemblPlantsGene:GSBRNA2T00101170001 | Gene3D:1.20.58.340 | Gene3D:2.40.128.330 | GO:A0A078E179 | ncoils:Coil |
| PANTHER:PTHR13890 | PANTHER:PTHR13890:SF4 | ProteinID:CDX95430 | ProteinID:CDX95430.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EE64C8 | MapMan:24.3.3.1 | : | : | : | : |
Description
BnaC01g33220D
Coordinates
chrLK031889:-:42086..44300
Molecular Weight (calculated)
50266.2 Da
IEP (calculated)
5.809
GRAVY (calculated)
-0.281
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGPRPEGFD SNAGQPRPTF PAGGSRKKGM GVRTWLVLWS SGKEQATEAG KHTIMRRTGL PARDLRILDP LLSYPSTVLG RERAIVINLE HIKAIITGQE
101: VLILNWKDPS VAPFIEELQR RIRCHHHATK PQEGAALGEA GTSQLSGEEA RKEKKRSLGN QDGSKVLPFE FVALEACLEA AITSLESEAV RLELEAHPAL
201: DKLTIKISTL NLERVRQIKS RLVAITGRVQ KVRDELEKLL NDDEDMAEMY LTDKLAQKLE NSSASSTSDT VVVDLPEGDE DDRHVADSFE HATLVSSESC
301: HRGSDAHNLL MRAHSALSRN SRGTSSTPSG MTNKLNVQEL EMLLEAYFVQ IDGTLNKLST LKEYVDDTED YINIMLDDKQ NNLLQMGVML TTAGLVMSLF
401: IAVAGVFGMN INIELFNDEV AGPGRFIWTV VGGTAGSLFL YFGAIGWYKH SRLLE
101: VLILNWKDPS VAPFIEELQR RIRCHHHATK PQEGAALGEA GTSQLSGEEA RKEKKRSLGN QDGSKVLPFE FVALEACLEA AITSLESEAV RLELEAHPAL
201: DKLTIKISTL NLERVRQIKS RLVAITGRVQ KVRDELEKLL NDDEDMAEMY LTDKLAQKLE NSSASSTSDT VVVDLPEGDE DDRHVADSFE HATLVSSESC
301: HRGSDAHNLL MRAHSALSRN SRGTSSTPSG MTNKLNVQEL EMLLEAYFVQ IDGTLNKLST LKEYVDDTED YINIMLDDKQ NNLLQMGVML TTAGLVMSLF
401: IAVAGVFGMN INIELFNDEV AGPGRFIWTV VGGTAGSLFL YFGAIGWYKH SRLLE
001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE
Arabidopsis Description
MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]
SUBAcon: [peroxisome,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.