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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • plastid 2
  • mitochondrion 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
endoplasmic reticulum: 23926064
plasma membrane: 27800704
plasma membrane: 28056797
gfp PMID: 23926064 doi
T Saito, NI Kobayashi, K Tanoi, N Iwata, H Suzuki, R Iwata, TM Nakanishi
Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657 Japan.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042441_P001 Maize mitochondrion 86.71 86.91
Zm00001d012102_P001 Maize mitochondrion 86.71 86.91
EES04071 Sorghum mitochondrion 86.26 86.46
TraesCS3B01G448800.1 Wheat mitochondrion 86.49 85.52
TraesCS3D01G408500.1 Wheat mitochondrion 86.26 85.11
TraesCS3A01G414000.1 Wheat mitochondrion 86.26 84.92
HORVU3Hr1G092200.1 Barley mitochondrion 85.59 84.82
GSMUA_Achr5P26100_001 Banana cytosol 65.99 66.74
KRH59642 Soybean cytosol 24.1 65.24
GSMUA_Achr11P... Banana cytosol 63.06 63.06
Os01t0869200-01 Rice mitochondrion, plastid 53.15 56.46
VIT_07s0031g02820.t01 Wine grape cytosol 54.95 55.08
KRH09687 Soybean mitochondrion 38.29 55.02
Os04t0430900-00 Rice cytosol, plastid 51.8 53.99
KRH23620 Soybean mitochondrion 49.77 53.25
Bra022441.1-P Field mustard cytosol 51.58 51.93
CDY66275 Canola cytosol, peroxisome, plasma membrane 51.58 51.93
KRH40989 Soybean mitochondrion 46.62 50.37
Bra038223.1-P Field mustard cytosol, golgi, peroxisome 50.23 48.48
CDX95430 Canola cytosol, golgi, peroxisome 49.55 48.35
AT3G19640.1 Thale cress cytosol, golgi, peroxisome, plastid 52.7 48.35
CDY42196 Canola cytosol 49.32 48.03
Os03t0742400-01 Rice plasma membrane 26.58 47.39
Solyc01g106900.2.1 Tomato cytosol, peroxisome, plastid 53.15 47.39
PGSC0003DMT400066130 Potato cytosol, peroxisome, plastid 52.48 46.79
Os04t0501100-00 Rice cytosol, plasma membrane 20.72 40.89
Os06t0650800-01 Rice plasma membrane 39.86 40.6
CDY58861 Canola nucleus 51.58 31.37
Os03t0137700-01 Rice plastid 29.28 29.89
Os03t0684400-01 Rice plastid 19.14 17.93
Protein Annotations
Gene3D:1.20.58.340Gene3D:2.40.128.330MapMan:24.3.3.1EntrezGene:4324988EMBL:AK120875EMBL:AY224580
ProteinID:BAB92573.1ProteinID:BAB92606.1ProteinID:BAD82756.1ProteinID:BAS75810.1ProteinID:BAS75811.1ProteinID:EAZ14556.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0008150
GO:GO:0015095GO:GO:0016020GO:GO:0016021GO:GO:1903830EnsemblPlantsGene:Os01g0908500EnsemblPlants:Os01t0908500-01
PANTHER:PTHR13890PANTHER:PTHR13890:SF9UniProt:Q8L4S2TMHMM:TMhelixUniParc:UPI00000A53A8RefSeq:XP_015616461.1
SEG:seg:::::
Description
MRS2/MGT family member 3Mg2+ transporter protein, CorA-like domain containing protein. (Os01t0908500-01);Similar to Magnesium transporter MRS2-F. (Os01t0908500-02)
Coordinates
chr1:-:39551526..39555254
Molecular Weight (calculated)
48358.5 Da
IEP (calculated)
4.435
GRAVY (calculated)
-0.196
Length
444 amino acids
Sequence
(BLAST)
001: MRPSAAAGGG GGGGGRRKAA AAAAAASREW LVVPASGQAR VEEAGKHAVM ARTGLPARDL RVLDPLLSYP STILGRERAI VVNLERVKAV ITAAEVLLPN
101: SKDPAFASFV CDLQARVLAS SSDQAAEFTD MEGESSAVTS PFPALTSTTP NELEMTNKNS NVVGGMTHSN SMPTLTAAKD GNTKVLPFEF RALEVCLESA
201: CRSLEEETST LEQEAYPALD ELTSKISTLN LERVRQIKSR LVAISGRVQK VRDELEHLLD DEMDMAEMYL TEKLTRQEIS ETSSRVEVDD PSQLEVDRDE
301: DYRSEADVSN GTFIGYKPHI EELEMLLEAY FVQIDGTLNK LSHLREYVDD TEDYINIMLD DKQNQLLQMG VMLSTATVVI TAGVAVVGLF GMNIGISLYA
401: DPTNEEEKRA SNMKFWETTL GTIAGCTVMY IVAMGWGKRS GLLQ
Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)
001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE
Arabidopsis Description
MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.