Factsheet for TraesCS3D01G408500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G448800.1	Wheat	mitochondrion	99.33	99.55
TraesCS3A01G414000.1	Wheat	mitochondrion	99.33	99.11
HORVU3Hr1G092200.1	Barley	mitochondrion	96.44	96.88
Zm00001d042441_P001	Maize	mitochondrion	85.33	86.68
Zm00001d012102_P001	Maize	mitochondrion	85.33	86.68
EES04071	Sorghum	mitochondrion	85.11	86.46
Os01t0908500-01	Rice	plasma membrane	85.11	86.26
GSMUA_Achr5P26100_001	Banana	cytosol	66.0	67.65
KRH59642	Soybean	cytosol	23.78	65.24
GSMUA_Achr11P...	Banana	cytosol	64.22	65.09
VIT_07s0031g02820.t01	Wine grape	cytosol	55.11	55.98
TraesCS3D01G373700.1	Wheat	mitochondrion	50.0	55.56
TraesCS3D01G373600.1	Wheat	mitochondrion	50.22	55.53
KRH09687	Soybean	mitochondrion	38.0	55.34
KRH23620	Soybean	mitochondrion	49.11	53.25
Bra022441.1-P	Field mustard	cytosol	51.56	52.61
CDY66275	Canola	cytosol, peroxisome, plasma membrane	51.56	52.61
KRH40989	Soybean	mitochondrion	46.67	51.09
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	50.89	49.78
CDX95430	Canola	cytosol, golgi, peroxisome	50.22	49.67
CDY42196	Canola	cytosol	50.0	49.34
AT3G19640.1	Thale cress	cytosol, golgi, peroxisome, plastid	52.22	48.55
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	52.0	46.99
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	51.78	46.79
TraesCS5D01G391700.1	Wheat	plastid	36.89	42.78
TraesCS2D01G354900.2	Wheat	cytosol, nucleus, plasma membrane	38.89	40.89
TraesCS7D01G494700.1	Wheat	plastid	38.67	39.1
CDY58861	Canola	nucleus	51.78	31.92
TraesCS1D01G208700.1	Wheat	mitochondrion	31.11	30.11
TraesCS4D01G025300.1	Wheat	plastid	18.67	18.79

Protein Annotations

EnsemblPlants:TraesCS3D01G408500.1	EnsemblPlantsGene:TraesCS3D01G408500	Gene3D:2.40.128.330	PANTHER:PTHR13890	PANTHER:PTHR13890:SF9	SEG:seg
TIGR:cd12823	TMHMM:TMhelix	MapMan:24.3.3.1	:	:	:

Description

No Description!

Coordinates

chr3D:-:522951965..522956280

Molecular Weight (calculated)

49249.6 Da

IEP (calculated)

4.596

GRAVY (calculated)

-0.208

Length

450 amino acids

Sequence
(BLAST)

001: MRPTATGPGG GVVRRKAGAA AAAAAASREW LVVPASGRAR VEEAGKHAVM ARTGLPARDL RVLDPLLSYP STILGRERAI VVNLERVKAV ITAAEVLLPN
101: SKDPDFARFV RDLQARVLTS ADQAAEFTDM DGESSAIASP FPAPSSSKGH ELEMAKRTPN AVGEMTHSSS VPTLTAMKDG STKVLPFEFR ALEVCLESAC
201: RSLEEETVTL EKEAYPALDE LTSKISTLNL ERVRQIKSRL VAISGRVQKV RDELEHLLDD EMDMAEMYLT EKLAREDISE TSSRVEVDDH DHDHDPSQLE
301: EDMDEDYRSE PAGTASNGSF IGYKPNIEEL EMLLEAYFVQ IDGTLNKLSH LREYVDDTED YINIMLDDKQ NQLLQMGVML STATVVITAG VAVVGLFGMN
401: IGISLYTPVG EEQTRAAHVK FWETTFGTIA GCTILYVIAM GWGKRSGLLQ

Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)

001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE

Arabidopsis Description

MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.