CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042441_P001	Maize	mitochondrion	96.39	96.39
Zm00001d012102_P001	Maize	mitochondrion	95.94	95.94
Os01t0908500-01	Rice	plasma membrane	86.46	86.26
TraesCS3B01G448800.1	Wheat	mitochondrion	86.68	85.52
TraesCS3D01G408500.1	Wheat	mitochondrion	86.46	85.11
TraesCS3A01G414000.1	Wheat	mitochondrion	86.46	84.92
HORVU3Hr1G092200.1	Barley	mitochondrion	85.55	84.6
GSMUA_Achr5P26100_001	Banana	cytosol	67.04	67.65
KRH59642	Soybean	cytosol	24.83	67.07
GSMUA_Achr11P...	Banana	cytosol	64.11	63.96
OQU81611	Sorghum	peroxisome, plasma membrane, plastid	17.16	59.84
KXG25477	Sorghum	plastid	46.5	57.38
KRH09687	Soybean	mitochondrion	39.05	55.99
VIT_07s0031g02820.t01	Wine grape	cytosol	54.85	54.85
EES01822	Sorghum	mitochondrion	51.02	54.59
EES10822	Sorghum	mitochondrion	51.47	54.16
KRH23620	Soybean	mitochondrion	50.34	53.73
KXG34188	Sorghum	plasma membrane	17.61	52.7
KRH40989	Soybean	mitochondrion	48.76	52.55
CDY66275	Canola	cytosol, peroxisome, plasma membrane	51.69	51.93
Bra022441.1-P	Field mustard	cytosol	51.69	51.93
CDX95430	Canola	cytosol, golgi, peroxisome	50.79	49.45
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	51.24	49.35
AT3G19640.1	Thale cress	cytosol, golgi, peroxisome, plastid	53.5	48.97
CDY42196	Canola	cytosol	50.34	48.9
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	37.25	47.41
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	52.37	46.59
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	52.37	46.59
EER90897	Sorghum	cytosol	38.83	44.44
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	39.5	39.68
CDY58861	Canola	nucleus	51.92	31.51
EER91996	Sorghum	mitochondrion	31.83	29.5
OQU93276	Sorghum	plastid	27.54	28.24
OQU91190	Sorghum	plastid	19.19	18.36

Protein Annotations

Gene3D:1.20.58.340	Gene3D:2.40.128.330	MapMan:24.3.3.1	EntrezGene:8056141	UniProt:C5XFJ1	EnsemblPlants:EES04071
ProteinID:EES04071	ProteinID:EES04071.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:1903830	PANTHER:PTHR13890
PANTHER:PTHR13890:SF9	EnsemblPlantsGene:SORBI_3003G395600	unigene:Sbi.12870	TMHMM:TMhelix	UniParc:UPI0001A854CA	RefSeq:XP_002458951.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:70601663..70609036

Molecular Weight (calculated)

48557.8 Da

IEP (calculated)

4.523

GRAVY (calculated)

-0.244

Length

443 amino acids

Sequence
(BLAST)

001: MRPHGAGTGG GGVGRRKVGA AAAAASREWM VVPASGPARV EEAGKHAVMA RTGLPARDLR VLDPLLSYPS TILGRERAIV VNLERVKALI TATEVLLPNT
101: KDPAFARFVR DLQTRVLASS SDQAAELTDM EGESSMVASP FPVPSSSKGH EVEMTKKTTA IVPEMTSSSS MPNLAVAKDG NTKVLPFEFR ALEVCLESAC
201: RSLEEETSTL EQEAYPALDE LTSKISTLNL ERVRQIKSRL VAISGRVQKV RDELEHLLDD EMDMAEMYLT EKLTQQEISE ASSRAEVEDP SHTEEDRDED
301: YRSEPDGSNG SFIGYKPNIE ELEMLLEAYF VQIDGTLNKL SHLREYVDDT EDYINIMLDD KQNQLLQMGV MLSTATVVIT AGVAVVGLFG MNIGISLYTD
401: PTTEEETRAA NRKFWETTFG TVAGCVILYI IAMGWGKRSG LLQ

Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)

001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE

Arabidopsis Description

MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.