CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU81611	Sorghum	peroxisome, plasma membrane, plastid	33.15	93.7
KXG34188	Sorghum	plasma membrane	35.1	85.14
EES10822	Sorghum	mitochondrion	66.02	56.29
Os04t0430900-00	Rice	cytosol, plastid	62.12	52.35
KRH59642	Soybean	cytosol	23.4	51.22
EES04071	Sorghum	mitochondrion	57.38	46.5
GSMUA_Achr5P26100_001	Banana	cytosol	56.82	46.47
GSMUA_Achr11P...	Banana	cytosol	55.43	44.82
EES01822	Sorghum	mitochondrion	48.75	42.27
KRH23620	Soybean	mitochondrion	47.63	41.2
KRH09687	Soybean	mitochondrion	35.38	41.1
Bra022441.1-P	Field mustard	cytosol	49.3	40.14
CDY66275	Canola	cytosol, peroxisome, plasma membrane	49.3	40.14
KRH40989	Soybean	mitochondrion	45.68	39.9
VIT_07s0031g02820.t01	Wine grape	cytosol	49.03	39.73
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	37.88	39.08
CDX95430	Canola	cytosol, golgi, peroxisome	48.47	38.24
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	48.47	37.83
CDY42196	Canola	cytosol	47.63	37.5
AT3G19640.1	Thale cress	cytosol, golgi, peroxisome, plastid	50.42	37.4
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	51.25	36.95
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	51.25	36.95
EER90897	Sorghum	cytosol	39.0	36.18
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	39.28	31.97
OQU93276	Sorghum	plastid	30.92	25.69
EER91996	Sorghum	mitochondrion	33.43	25.1
CDY58861	Canola	nucleus	49.86	24.52
OQU91190	Sorghum	plastid	22.01	17.06

Protein Annotations

EnsemblPlants:KXG25477	EnsemblPlantsGene:SORBI_3007G185200	Gene3D:1.20.58.340	Gene3D:2.40.128.330	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR13890	PANTHER:PTHR13890:SF9	ProteinID:KXG25477	ProteinID:KXG25477.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI00081ABEAD	UniProt:A0A1B6PIM9	MapMan:24.3.3.1	:	:

Description

hypothetical protein

Coordinates

chr7:-:61831349..61833678

Molecular Weight (calculated)

39024.6 Da

IEP (calculated)

4.561

GRAVY (calculated)

-0.045

Length

359 amino acids

Sequence
(BLAST)

001: MATATATPPR RRHAATGAAA GEWAALSASG EWRAEAIGKH QLVRRTGLSA RDLRALDPAL SHPSSVMARD RAVVVNLDRV RAVITATEDG EVGKDGGVSP
101: PSGGGGGKAL PFEFRALEVC LEYACKSLEH ETSMLEKEAY PALDALTSRI STLNLEHVRQ IKCRLVAIAG GVHKVRDELE HLLDDDADMA AMHLSEKAAF
201: QAASQSSRFD IGTELVEIDG EGDEDEAGTE QEEQGSMTFM PKIDELESLL EVYFVQIDGT LNKLSTLREY VDDTEDYINI MLDDKQNQLL QMGVVLSTVT
301: LLVTSAVVVT AIFGMNIHIA LYRITDLNVF WEAVGGTLAG VAMLFLGAML YYWKNGILR

Best Arabidopsis Sequence Match ( AT1G16010.1 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.