CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, plastid
Any Predictor:	nucleus, peroxisome, plasma membrane, plastid
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34188	Sorghum	plasma membrane	97.64	83.78
KXG25477	Sorghum	plastid	93.7	33.15
EES10822	Sorghum	mitochondrion	60.63	18.29
Os04t0430900-00	Rice	cytosol, plastid	59.06	17.61
EES01822	Sorghum	mitochondrion	56.69	17.39
GSMUA_Achr5P26100_001	Banana	cytosol	59.84	17.31
EES04071	Sorghum	mitochondrion	59.84	17.16
GSMUA_Achr11P...	Banana	cytosol	58.27	16.67
Bra022441.1-P	Field mustard	cytosol	51.97	14.97
CDY66275	Canola	cytosol, peroxisome, plasma membrane	51.97	14.97
VIT_07s0031g02820.t01	Wine grape	cytosol	51.18	14.67
CDX95430	Canola	cytosol, golgi, peroxisome	51.97	14.51
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	51.97	14.35
CDY42196	Canola	cytosol	51.18	14.25
KRH23620	Soybean	mitochondrion	45.67	13.98
EER90897	Sorghum	cytosol	42.52	13.95
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	54.33	13.86
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	54.33	13.86
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	37.8	13.79
AT3G19640.1	Thale cress	cytosol, golgi, peroxisome, plastid	51.18	13.43
KRH40989	Soybean	mitochondrion	42.52	13.14
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	38.58	11.11
CDY58861	Canola	nucleus	51.18	8.9
EER91996	Sorghum	mitochondrion	31.5	8.37
OQU93276	Sorghum	plastid	26.77	7.87
OQU91190	Sorghum	plastid	23.62	6.48
KRH09687	Soybean	mitochondrion	13.39	5.5
KRH59642	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.58.340	MapMan:24.3.3.1	UniProt:A0A1Z5RDN4	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
GO:GO:0055085	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	EnsemblPlants:OQU81611	ProteinID:OQU81611	ProteinID:OQU81611.1	PFAM:PF01544
PANTHER:PTHR13890	PANTHER:PTHR13890:SF7	EnsemblPlantsGene:SORBI_3006G085200	TMHMM:TMhelix	UniParc:UPI000B8BA929	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:45488352..45488992

Molecular Weight (calculated)

14321.5 Da

IEP (calculated)

4.123

GRAVY (calculated)

0.452

Length

127 amino acids

Sequence
(BLAST)

001: MDHGVEFLPK IDELESLLEV YFVQIDGTLN KLSTLREYVD DTEDYINIML DDKQNQLLQM GVVLSTVTLL VTGAVVVTAI FGMNIHITLY RITDLNVFWE
101: AVGGTLASVA TLFLGAMLYY WKNGILR

Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)

001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE

Arabidopsis Description

MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.