Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022441.1-P | Field mustard | cytosol | 99.77 | 99.77 |
| AT3G19640.1 | Thale cress | cytosol, golgi, peroxisome, plastid | 87.76 | 79.96 |
| CDY42196 | Canola | cytosol | 78.0 | 75.44 |
| CDX95430 | Canola | cytosol, golgi, peroxisome | 77.55 | 75.16 |
| KRH77919 | Soybean | cytosol | 63.04 | 70.74 |
| KRH27585 | Soybean | cytosol | 61.9 | 68.42 |
| VIT_03s0091g01190.t01 | Wine grape | cytosol | 68.93 | 60.68 |
| Solyc01g106900.2.1 | Tomato | cytosol, peroxisome, plastid | 68.25 | 60.44 |
| PGSC0003DMT400066130 | Potato | cytosol, peroxisome, plastid | 67.8 | 60.04 |
| CDY58861 | Canola | nucleus | 97.96 | 59.18 |
| GSMUA_Achr5P01890_001 | Banana | nucleus | 58.96 | 52.53 |
| Zm00001d012102_P001 | Maize | mitochondrion | 52.61 | 52.37 |
| OQU81611 | Sorghum | peroxisome, plasma membrane, plastid | 14.97 | 51.97 |
| TraesCS3B01G448800.1 | Wheat | mitochondrion | 52.83 | 51.89 |
| EES04071 | Sorghum | mitochondrion | 51.93 | 51.69 |
| TraesCS3A01G414000.1 | Wheat | mitochondrion | 52.83 | 51.66 |
| Os01t0908500-01 | Rice | plasma membrane | 51.93 | 51.58 |
| HORVU3Hr1G092200.1 | Barley | mitochondrion | 52.38 | 51.56 |
| TraesCS3D01G408500.1 | Wheat | mitochondrion | 52.61 | 51.56 |
| Zm00001d042441_P001 | Maize | mitochondrion | 51.7 | 51.47 |
| TraesCS3D01G373700.1 | Wheat | mitochondrion | 45.58 | 49.63 |
| TraesCS3B01G413200.1 | Wheat | mitochondrion | 45.58 | 49.63 |
| TraesCS3A01G380600.1 | Wheat | mitochondrion | 45.58 | 49.63 |
| KXG25477 | Sorghum | plastid | 40.14 | 49.3 |
| HORVU3Hr1G082870.5 | Barley | mitochondrion | 44.9 | 48.77 |
| EES01822 | Sorghum | mitochondrion | 45.12 | 48.07 |
| CDX87352 | Canola | cytosol, peroxisome, plasma membrane | 43.99 | 47.32 |
| CDX88569 | Canola | cytosol, peroxisome, plasma membrane | 43.99 | 47.32 |
| TraesCS3D01G373600.1 | Wheat | mitochondrion | 43.54 | 47.17 |
| TraesCS3B01G413100.1 | Wheat | cytosol, nucleus, plastid, vacuole | 43.54 | 47.17 |
| Zm00001d003666_P001 | Maize | mitochondrion | 42.86 | 46.9 |
| Os01t0869200-01 | Rice | mitochondrion, plastid | 44.44 | 46.89 |
| EES10822 | Sorghum | mitochondrion | 44.44 | 46.56 |
| TraesCS3A01G380500.1 | Wheat | mitochondrion | 42.86 | 46.32 |
| CDX81228 | Canola | cytosol, mitochondrion, plastid | 38.55 | 45.95 |
| HORVU3Hr1G082880.2 | Barley | cytosol, mitochondrion, peroxisome, vacuole | 43.31 | 45.58 |
| CDY64845 | Canola | mitochondrion, peroxisome, plastid | 37.64 | 45.36 |
| KXG34188 | Sorghum | plasma membrane | 15.19 | 45.27 |
| CDY51292 | Canola | cytosol, peroxisome, plastid | 38.78 | 45.24 |
| CDY56489 | Canola | cytosol, peroxisome, plastid | 38.78 | 45.24 |
| Zm00001d025416_P001 | Maize | mitochondrion | 40.59 | 44.97 |
| CDX85800 | Canola | cytosol | 39.46 | 44.73 |
| CDY64844 | Canola | cytosol | 39.46 | 44.73 |
| CDY22292 | Canola | plastid | 41.04 | 44.69 |
| CDY49735 | Canola | mitochondrion, peroxisome, plasma membrane, plastid | 41.04 | 44.58 |
| CDY18706 | Canola | cytosol, mitochondrion, plastid | 38.78 | 44.53 |
| Os04t0430900-00 | Rice | cytosol, plastid | 42.63 | 44.13 |
| CDY35061 | Canola | plastid | 41.95 | 44.05 |
| CDY46811 | Canola | cytosol | 37.19 | 43.73 |
| CDY33361 | Canola | plastid | 40.59 | 42.82 |
| CDY31314 | Canola | cytosol | 37.19 | 42.71 |
| CDY51207 | Canola | cytosol, nucleus, peroxisome | 39.68 | 41.57 |
| CDY36615 | Canola | cytosol, nucleus, peroxisome | 39.46 | 41.33 |
| CDY02984 | Canola | cytosol, peroxisome, plasma membrane | 39.46 | 41.33 |
| CDY39718 | Canola | cytosol | 32.65 | 38.1 |
| CDY33715 | Canola | cytosol | 31.75 | 37.74 |
| CDY65607 | Canola | plastid | 36.28 | 37.3 |
| CDY49260 | Canola | plastid | 36.05 | 37.06 |
| CDX99295 | Canola | cytosol, mitochondrion, nucleus, plastid | 35.15 | 36.99 |
| CDX92290 | Canola | cytosol, mitochondrion, nucleus, plastid | 34.92 | 36.67 |
| CDY26960 | Canola | plastid | 18.14 | 17.47 |
| CDX92333 | Canola | plastid | 18.14 | 17.2 |
Protein Annotations
| EnsemblPlants:CDY66275 | EnsemblPlantsGene:GSBRNA2T00053308001 | Gene3D:2.40.128.330 | GO:A0A078JIK8 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR13890 | PANTHER:PTHR13890:SF4 | ProteinID:CDY66275 | ProteinID:CDY66275.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0004EEFAFA | UniProt:A0A078JIK8 | MapMan:24.3.3.1 | : | : |
Description
BnaAnng21960DBnaAnng21960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIK8]
Coordinates
chrLK035180:+:850..3095
Molecular Weight (calculated)
49159.7 Da
IEP (calculated)
4.947
GRAVY (calculated)
-0.334
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGGPRPEDF ETNPSTPITG QPTPTYPAGA RKKGVGVRTW LVLCSRGQAQ TTEVGKHAIM RRTGLPARDL RILDPLLSYP STVLGRERAI VINLEHIKAI
101: ITAQEVLLLN SKDPSVAPFI DELQRRILCH YRATKPKEEE NYEGEMDQAQ GGGDGTPLLF GDEAKKDAKQ SLENQDGSKV LPFEFVALEA CLEAASSSLE
201: SEAVRLELEA HPALDKLTSK ISTLNLERVR QIKSRLVAIT GRVQKVRDEL EHLLDDDEDM AEMYLTEKLP AESASESNRD ESYLRANEDA HDLLMSTHSA
301: LSRNSRGTHT SSTRSAMTNK FDVEELEMLL EAYFVQIDGT LNKLSTLREY VDDTEDYINI MLDDKQNHLL QMGVMLTTAT LVMSAFIAVA GVFGMNITIE
401: LFKDEKAGPT RFAWTVIGGF IGSIFLYVGA IGWWKQKRLL E
101: ITAQEVLLLN SKDPSVAPFI DELQRRILCH YRATKPKEEE NYEGEMDQAQ GGGDGTPLLF GDEAKKDAKQ SLENQDGSKV LPFEFVALEA CLEAASSSLE
201: SEAVRLELEA HPALDKLTSK ISTLNLERVR QIKSRLVAIT GRVQKVRDEL EHLLDDDEDM AEMYLTEKLP AESASESNRD ESYLRANEDA HDLLMSTHSA
301: LSRNSRGTHT SSTRSAMTNK FDVEELEMLL EAYFVQIDGT LNKLSTLREY VDDTEDYINI MLDDKQNHLL QMGVMLTTAT LVMSAFIAVA GVFGMNITIE
401: LFKDEKAGPT RFAWTVIGGF IGSIFLYVGA IGWWKQKRLL E
001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE
Arabidopsis Description
MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]
SUBAcon: [peroxisome,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.