Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68330 | Canola | mitochondrion | 94.29 | 92.96 |
| Bra003942.1-P | Field mustard | mitochondrion | 93.57 | 92.25 |
| CDY11545 | Canola | mitochondrion | 85.0 | 90.84 |
| CDX96277 | Canola | mitochondrion | 85.0 | 90.84 |
| CDY03721 | Canola | mitochondrion | 81.43 | 87.02 |
| AT1G70780.1 | Thale cress | mitochondrion | 85.0 | 85.0 |
| CDY09482 | Canola | mitochondrion | 81.43 | 84.44 |
| CDY71620 | Canola | cytosol, mitochondrion | 66.43 | 67.39 |
| CDX91699 | Canola | cytosol | 70.0 | 66.67 |
| CDY21419 | Canola | mitochondrion | 65.71 | 66.67 |
| CDY41461 | Canola | cytosol | 69.29 | 65.99 |
| VIT_01s0011g05250.t01 | Wine grape | mitochondrion | 60.0 | 60.43 |
| Solyc04g074100.2.1 | Tomato | mitochondrion | 57.14 | 58.82 |
| PGSC0003DMT400016382 | Potato | mitochondrion | 55.71 | 57.35 |
| KRH58638 | Soybean | mitochondrion | 53.57 | 55.56 |
| KRH42545 | Soybean | mitochondrion | 52.86 | 54.01 |
| Solyc04g007840.2.1 | Tomato | mitochondrion | 55.0 | 53.47 |
| CDY36234 | Canola | mitochondrion | 49.29 | 51.49 |
| PGSC0003DMT400075823 | Potato | mitochondrion | 52.14 | 51.05 |
| VIT_14s0006g02980.t01 | Wine grape | cytosol | 37.86 | 48.62 |
| CDY17663 | Canola | cytosol | 47.86 | 46.85 |
| CDY17461 | Canola | cytosol, mitochondrion, nucleus | 43.57 | 45.52 |
| CDY04091 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 43.57 | 45.52 |
| CDX74563 | Canola | cytosol, nucleus, plastid | 35.71 | 35.21 |
| CDY01710 | Canola | cytosol, nucleus, plastid | 34.29 | 33.8 |
Protein Annotations
| EnsemblPlants:CDY23481 | EnsemblPlantsGene:GSBRNA2T00022104001 | PANTHER:PTHR33270 | PANTHER:PTHR33270:SF14 | ProteinID:CDY23481 | ProteinID:CDY23481.1 |
| SEG:seg | UniParc:UPI0004EE27F9 | UniProt:A0A078GDN9 | MapMan:35.2 | : | : |
Description
BnaC06g24500DBnaC06g24500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDN9]
Coordinates
chrLK032144:+:88630..89404
Molecular Weight (calculated)
15201.4 Da
IEP (calculated)
10.064
GRAVY (calculated)
-0.173
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLYNKQKKN QNAKGNRILI SVTVLGSAGP IRFVAYEEDL VASVVDTALK CYAREGRLPL LGSDFNDFLL YCPMFGPEAL SAWSAIGSLG ARNFTLCRKP
101: EDTKVVKEGD GKSNSINGAK KGGSLKAWIN KSFSLKVSSH
101: EDTKVVKEGD GKSNSINGAK KGGSLKAWIN KSFSLKVSSH
001: MLLYNKQKKN QNAKGNRILI SVTVLGSAGP IRFVAYEDDL VASVIDTALK GYAREGRLPL LGSDFNDFLL YCPMVGPEAL STWDAIGSLG ARNFMLCRKP
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH
Arabidopsis Description
At1g70780 [Source:UniProtKB/TrEMBL;Acc:Q9S812]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.