Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016360.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX91699 | Canola | cytosol | 93.2 | 93.2 |
| CDY71620 | Canola | cytosol, mitochondrion | 80.27 | 85.51 |
| CDY21419 | Canola | mitochondrion | 80.27 | 85.51 |
| CDY11545 | Canola | mitochondrion | 68.71 | 77.1 |
| CDX96277 | Canola | mitochondrion | 68.71 | 77.1 |
| CDY03721 | Canola | mitochondrion | 64.63 | 72.52 |
| AT1G23150.1 | Thale cress | cytosol, mitochondrion | 68.03 | 70.92 |
| CDY23481 | Canola | mitochondrion | 65.99 | 69.29 |
| CDX68330 | Canola | mitochondrion | 66.67 | 69.01 |
| CDY09482 | Canola | mitochondrion | 63.27 | 68.89 |
| VIT_01s0011g05250.t01 | Wine grape | mitochondrion | 55.1 | 58.27 |
| Solyc04g074100.2.1 | Tomato | mitochondrion | 53.06 | 57.35 |
| PGSC0003DMT400016382 | Potato | mitochondrion | 51.7 | 55.88 |
| KRH58638 | Soybean | mitochondrion | 50.34 | 54.81 |
| KRH42545 | Soybean | mitochondrion | 49.66 | 53.28 |
| PGSC0003DMT400075823 | Potato | mitochondrion | 51.7 | 53.15 |
| Solyc04g007840.2.1 | Tomato | mitochondrion | 48.3 | 49.31 |
| CDY36234 | Canola | mitochondrion | 44.9 | 49.25 |
| VIT_14s0006g02980.t01 | Wine grape | cytosol | 36.05 | 48.62 |
| CDY17663 | Canola | cytosol | 45.58 | 46.85 |
| CDY17461 | Canola | cytosol, mitochondrion, nucleus | 40.14 | 44.03 |
| CDY04091 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 40.14 | 44.03 |
| CDX74563 | Canola | cytosol, nucleus, plastid | 36.73 | 38.03 |
| CDY01710 | Canola | cytosol, nucleus, plastid | 35.37 | 36.62 |
Protein Annotations
| EnsemblPlants:CDY41461 | EnsemblPlantsGene:GSBRNA2T00073063001 | PANTHER:PTHR33270 | PANTHER:PTHR33270:SF14 | ProteinID:CDY41461 | ProteinID:CDY41461.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI00025465B8 | UniProt:A0A078HUQ3 | MapMan:35.2 | : |
Description
BnaA08g20630DBnaA08g20630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUQ3]
Coordinates
chrLK032498:-:119375..120191
Molecular Weight (calculated)
16688.3 Da
IEP (calculated)
10.199
GRAVY (calculated)
-0.373
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMYNKHKKK KRETVNIKGN RILISVAFLG SAGPIRFVAY EGDLVANVID TALKCYAREG RLPILGSDFN DFLFYCPMVG PEALSPWEAI GSLGARNFML
101: CEKPEEEKKK IEEQDNGRRS SFPINGARKR SFRAWINKSF SLKVTTH
101: CEKPEEEKKK IEEQDNGRRS SFPINGARKR SFRAWINKSF SLKVTTH
001: MLLYKKKNQI VKGNRILISV TFLGSAGPIR FVANEGDLVA SVIDTALKCY AREGRLPILG SDFNDFVFYC PMVGPGALSP WEAIGSVGVR NFMLCKKKPE
101: EKKVEEDKGR SNFPINGARK GAGGSFKAWI NKSLRLKVTT H
101: EKKVEEDKGR SNFPINGARK GAGGSFKAWI NKSLRLKVTT H
Arabidopsis Description
Uncharacterized protein At1g23150 [Source:UniProtKB/TrEMBL;Acc:Q84JS3]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.