Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41461 | Canola | cytosol | 93.2 | 93.2 |
| CDY71620 | Canola | cytosol, mitochondrion | 80.95 | 86.23 |
| CDY21419 | Canola | mitochondrion | 80.27 | 85.51 |
| CDX96277 | Canola | mitochondrion | 70.07 | 78.63 |
| CDY11545 | Canola | mitochondrion | 70.07 | 78.63 |
| CDY03721 | Canola | mitochondrion | 65.99 | 74.05 |
| CDX68330 | Canola | mitochondrion | 68.71 | 71.13 |
| CDY09482 | Canola | mitochondrion | 64.63 | 70.37 |
| CDY23481 | Canola | mitochondrion | 66.67 | 70.0 |
| AT1G23150.1 | Thale cress | cytosol, mitochondrion | 66.67 | 69.5 |
| Solyc04g074100.2.1 | Tomato | mitochondrion | 54.42 | 58.82 |
| VIT_01s0011g05250.t01 | Wine grape | mitochondrion | 55.1 | 58.27 |
| PGSC0003DMT400016382 | Potato | mitochondrion | 53.06 | 57.35 |
| KRH58638 | Soybean | mitochondrion | 52.38 | 57.04 |
| KRH42545 | Soybean | mitochondrion | 51.02 | 54.74 |
| PGSC0003DMT400075823 | Potato | mitochondrion | 51.7 | 53.15 |
| Solyc04g007840.2.1 | Tomato | mitochondrion | 48.98 | 50.0 |
| CDY36234 | Canola | mitochondrion | 44.9 | 49.25 |
| VIT_14s0006g02980.t01 | Wine grape | cytosol | 35.37 | 47.71 |
| CDY17663 | Canola | cytosol | 45.58 | 46.85 |
| CDY17461 | Canola | cytosol, mitochondrion, nucleus | 40.82 | 44.78 |
| CDY04091 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 40.14 | 44.03 |
| CDX74563 | Canola | cytosol, nucleus, plastid | 36.05 | 37.32 |
| CDY01710 | Canola | cytosol, nucleus, plastid | 34.69 | 35.92 |
Protein Annotations
| EnsemblPlants:CDX91699 | EnsemblPlantsGene:GSBRNA2T00153186001 | GO:A0A078DT84 | PANTHER:PTHR33270 | PANTHER:PTHR33270:SF14 | ProteinID:CDX91699 |
| ProteinID:CDX91699.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF21C7 | MapMan:35.2 | : |
Description
BnaC08g06180D
Coordinates
chrLK031869:+:287006..287924
Molecular Weight (calculated)
16656.2 Da
IEP (calculated)
9.886
GRAVY (calculated)
-0.359
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMYNKQKKK KKRETVTIKE NRILISVAFL GSAGPIRFVA YEGDLVANVI DTALKCYARE GRLPVLGSDF NDFLFYCPMV GPEALSPWEA IGSLGARNFM
101: LCEKPEEEKK KVEEEDSGRS SFPINGARKR SFRAWINKSF SLKVTTH
101: LCEKPEEEKK KVEEEDSGRS SFPINGARKR SFRAWINKSF SLKVTTH
001: MLLYKKKNQI VKGNRILISV TFLGSAGPIR FVANEGDLVA SVIDTALKCY AREGRLPILG SDFNDFVFYC PMVGPGALSP WEAIGSVGVR NFMLCKKKPE
101: EKKVEEDKGR SNFPINGARK GAGGSFKAWI NKSLRLKVTT H
101: EKKVEEDKGR SNFPINGARK GAGGSFKAWI NKSLRLKVTT H
Arabidopsis Description
Uncharacterized protein At1g23150 [Source:UniProtKB/TrEMBL;Acc:Q84JS3]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.