Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17663 | Canola | cytosol | 88.06 | 82.52 |
| CDY04091 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 74.63 | 74.63 |
| CDY17461 | Canola | cytosol, mitochondrion, nucleus | 70.9 | 70.9 |
| CDX96277 | Canola | mitochondrion | 52.24 | 53.44 |
| CDY11545 | Canola | mitochondrion | 52.24 | 53.44 |
| CDY23481 | Canola | mitochondrion | 51.49 | 49.29 |
| CDY03721 | Canola | mitochondrion | 47.76 | 48.85 |
| CDX68330 | Canola | mitochondrion | 51.49 | 48.59 |
| CDY09482 | Canola | mitochondrion | 47.76 | 47.41 |
| CDX91699 | Canola | cytosol | 49.25 | 44.9 |
| CDY41461 | Canola | cytosol | 49.25 | 44.9 |
| CDY71620 | Canola | cytosol, mitochondrion | 45.52 | 44.2 |
| CDY21419 | Canola | mitochondrion | 44.78 | 43.48 |
| CDX74563 | Canola | cytosol, nucleus, plastid | 38.81 | 36.62 |
| CDY01710 | Canola | cytosol, nucleus, plastid | 38.81 | 36.62 |
Protein Annotations
| EnsemblPlants:CDY36234 | EnsemblPlantsGene:GSBRNA2T00060175001 | GO:A0A078HFP2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33270 | PANTHER:PTHR33270:SF5 | ProteinID:CDY36234 | ProteinID:CDY36234.1 | TMHMM:TMhelix | UniParc:UPI0004EEB64E |
| UniProt:A0A078HFP2 | MapMan:35.2 | : | : | : | : |
Description
BnaC07g20880DBnaC07g20880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFP2]
Coordinates
chrLK032371:+:48711..49200
Molecular Weight (calculated)
14998.2 Da
IEP (calculated)
10.534
GRAVY (calculated)
-0.189
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLYNNNKQK KTHKSKINRF LVSISFLGSA GPIRFVVKED ETVSNVIDYA LKCYAREGRL PLLGSDSSFF LLYSPYYAVE AFNPWGKIGS TGLRNFVLSK
101: NLGGSVDTTT TIRKTSGKWK AWLNKSLGLM VPSH
101: NLGGSVDTTT TIRKTSGKWK AWLNKSLGLM VPSH
001: MLYNNKHQRN QKSKTTNRFL VSINVLGSAG FHFSDQIPAF SDFIALTVPL KGKIGSTGSR NFVLSNKLET QNLEDSMMTT TTTRKTSGRW KAWLNKSFGL
101: MVPSH
101: MVPSH
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 30201 Blast hits to 17322 /.../ins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT2G01554]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.