Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
- nucleus 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024566.1-P | Field mustard | cytosol | 48.55 | 100.0 |
| CDY71620 | Canola | cytosol, mitochondrion | 94.93 | 94.93 |
| CDX91699 | Canola | cytosol | 85.51 | 80.27 |
| CDY41461 | Canola | cytosol | 85.51 | 80.27 |
| CDX96277 | Canola | mitochondrion | 71.01 | 74.81 |
| CDY11545 | Canola | mitochondrion | 71.01 | 74.81 |
| AT1G23150.1 | Thale cress | cytosol, mitochondrion | 73.91 | 72.34 |
| CDY03721 | Canola | mitochondrion | 68.12 | 71.76 |
| CDY09482 | Canola | mitochondrion | 66.67 | 68.15 |
| CDX68330 | Canola | mitochondrion | 68.84 | 66.9 |
| CDY23481 | Canola | mitochondrion | 66.67 | 65.71 |
| Solyc04g074100.2.1 | Tomato | mitochondrion | 58.7 | 59.56 |
| PGSC0003DMT400016382 | Potato | mitochondrion | 57.97 | 58.82 |
| VIT_01s0011g05250.t01 | Wine grape | mitochondrion | 57.25 | 56.83 |
| KRH58638 | Soybean | mitochondrion | 51.45 | 52.59 |
| KRH42545 | Soybean | mitochondrion | 50.72 | 51.09 |
| Solyc04g007840.2.1 | Tomato | mitochondrion | 50.72 | 48.61 |
| PGSC0003DMT400075823 | Potato | mitochondrion | 50.0 | 48.25 |
| VIT_14s0006g02980.t01 | Wine grape | cytosol | 37.68 | 47.71 |
| CDY36234 | Canola | mitochondrion | 43.48 | 44.78 |
| CDY17663 | Canola | cytosol | 44.93 | 43.36 |
| CDY04091 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 42.03 | 43.28 |
| CDY17461 | Canola | cytosol, mitochondrion, nucleus | 39.86 | 41.04 |
| CDX74563 | Canola | cytosol, nucleus, plastid | 36.96 | 35.92 |
| CDY01710 | Canola | cytosol, nucleus, plastid | 35.51 | 34.51 |
Protein Annotations
| EnsemblPlants:CDY21419 | EnsemblPlantsGene:GSBRNA2T00015807001 | PANTHER:PTHR33270 | PANTHER:PTHR33270:SF14 | ProteinID:CDY21419 | ProteinID:CDY21419.1 |
| SEG:seg | UniParc:UPI0004EDFBAF | UniProt:A0A078G7M8 | MapMan:35.2 | : | : |
Description
BnaA09g30080DBnaA09g30080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7M8]
Coordinates
chrLK032120:+:603344..604027
Molecular Weight (calculated)
15537.0 Da
IEP (calculated)
9.945
GRAVY (calculated)
-0.165
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MLYKLKKREV VKGNRILISV TFLGSPGPIR FVAYEGDLVA AVIDTALKCY AREGRLPILG SDFNDFIFYC PMVGPEALSP WEAIGSLGAR NFMLCEKSEE
101: KKKLEEENGR SSFPINGARK RSFRAWINKS FSLKVTTH
101: KKKLEEENGR SSFPINGARK RSFRAWINKS FSLKVTTH
001: MLLYKKKNQI VKGNRILISV TFLGSAGPIR FVANEGDLVA SVIDTALKCY AREGRLPILG SDFNDFVFYC PMVGPGALSP WEAIGSVGVR NFMLCKKKPE
101: EKKVEEDKGR SNFPINGARK GAGGSFKAWI NKSLRLKVTT H
101: EKKVEEDKGR SNFPINGARK GAGGSFKAWI NKSLRLKVTT H
Arabidopsis Description
Uncharacterized protein At1g23150 [Source:UniProtKB/TrEMBL;Acc:Q84JS3]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.