Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21419 | Canola | mitochondrion | 72.34 | 73.91 |
| CDY71620 | Canola | cytosol, mitochondrion | 71.63 | 73.19 |
| Bra016360.1-P | Field mustard | cytosol | 70.92 | 68.03 |
| CDY41461 | Canola | cytosol | 70.92 | 68.03 |
| AT1G70780.1 | Thale cress | mitochondrion | 67.38 | 67.86 |
| CDX91699 | Canola | cytosol | 69.5 | 66.67 |
| Bra024566.1-P | Field mustard | cytosol | 29.08 | 61.19 |
| Solyc04g074100.2.1 | Tomato | mitochondrion | 58.87 | 61.03 |
| VIT_01s0011g05250.t01 | Wine grape | mitochondrion | 58.87 | 59.71 |
| PGSC0003DMT400016382 | Potato | mitochondrion | 56.74 | 58.82 |
| KRH58638 | Soybean | mitochondrion | 53.19 | 55.56 |
| KRH42545 | Soybean | mitochondrion | 53.9 | 55.47 |
| Solyc04g007840.2.1 | Tomato | mitochondrion | 53.9 | 52.78 |
| PGSC0003DMT400075823 | Potato | mitochondrion | 53.19 | 52.45 |
| VIT_14s0006g02980.t01 | Wine grape | cytosol | 39.72 | 51.38 |
| AT5G37730.1 | Thale cress | cytosol | 37.59 | 29.12 |
Protein Annotations
| ArrayExpress:AT1G23150 | EMBL:BT002946 | EMBL:BT004432 | EnsemblPlants:AT1G23150.1 | EnsemblPlantsGene:AT1G23150 | EntrezGene:838923 |
| GO:GO:0008150 | PANTHER:PTHR33270 | PANTHER:PTHR33270:SF14 | ProteinID:AEE30348.1 | ProteinID:OAP17664.1 | RefSeq:AT1G23150 |
| RefSeq:AT1G23150-TAIR-G | RefSeq:NP_173728.1 | SEG:seg | TAIR:AT1G23150 | TAIR:AT1G23150.1 | Unigene:At.41566 |
| UniParc:UPI000000BE53 | UniProt:A0A178WHU0 | UniProt:Q84JS3 | MapMan:35.2 | : | : |
Description
Uncharacterized protein At1g23150 [Source:UniProtKB/TrEMBL;Acc:Q84JS3]
Coordinates
chr1:+:8206549..8207618
Molecular Weight (calculated)
15492.0 Da
IEP (calculated)
10.479
GRAVY (calculated)
-0.129
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLYKKKNQI VKGNRILISV TFLGSAGPIR FVANEGDLVA SVIDTALKCY AREGRLPILG SDFNDFVFYC PMVGPGALSP WEAIGSVGVR NFMLCKKKPE
101: EKKVEEDKGR SNFPINGARK GAGGSFKAWI NKSLRLKVTT H
101: EKKVEEDKGR SNFPINGARK GAGGSFKAWI NKSLRLKVTT H
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.