Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01710 | Canola | cytosol, nucleus, plastid | 51.1 | 65.49 |
| Bra028146.1-P | Field mustard | cytosol, nucleus, plastid | 50.55 | 64.79 |
| CDX74563 | Canola | cytosol, nucleus, plastid | 50.55 | 64.79 |
| AT1G23150.1 | Thale cress | cytosol, mitochondrion | 29.12 | 37.59 |
| AT1G70780.1 | Thale cress | mitochondrion | 25.27 | 32.86 |
| HORVU5Hr1G018240.1 | Barley | mitochondrion | 25.82 | 30.52 |
| TraesCS4A01G166700.1 | Wheat | mitochondrion | 24.73 | 29.8 |
| Zm00001d048449_P001 | Maize | mitochondrion | 26.92 | 28.82 |
| TraesCS5A01G069000.1 | Wheat | mitochondrion | 24.73 | 28.66 |
| Os02t0324700-01 | Rice | cytosol, mitochondrion | 26.37 | 25.67 |
| TraesCS5D01G081100.1 | Wheat | mitochondrion | 24.18 | 21.67 |
Protein Annotations
| ArrayExpress:AT5G37730 | EMBL:DQ447008 | EnsemblPlants:AT5G37730.1 | EnsemblPlantsGene:AT5G37730 | EntrezGene:833751 | GO:GO:0008150 |
| PANTHER:PTHR33270 | PANTHER:PTHR33270:SF14 | ProteinID:AED94224.1 | ProteinID:BAB08318.1 | RefSeq:AT5G37730 | RefSeq:AT5G37730-TAIR-G |
| RefSeq:NP_198589.1 | SEG:seg | TAIR:AT5G37730 | TAIR:AT5G37730.1 | UniParc:UPI000009EE13 | UniProt:Q9FHP8 |
| MapMan:35.2 | : | : | : | : | : |
Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FHP8]
Coordinates
chr5:-:14986000..14987014
Molecular Weight (calculated)
21146.4 Da
IEP (calculated)
9.953
GRAVY (calculated)
-0.611
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRNENVKGV MKRKNKKLLV SVNVLGSVGP IRFLANEDDE VSSAINTTLK AYARQGRIPV LGFDVDNFIF YSINAGFNTL HPQEKIGSMD VTNFLMCKKE
101: PRPLEKVEGI RESRARIGHG WKTTHLLRFL LGYIPYNHKP NSTSQMDYRS FGDGNAYCIE EYQQEFQRIT KIKEYQREFQ RF
101: PRPLEKVEGI RESRARIGHG WKTTHLLRFL LGYIPYNHKP NSTSQMDYRS FGDGNAYCIE EYQQEFQRIT KIKEYQREFQ RF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.