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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plastid 3
  • mitochondrion 4
  • peroxisome 1
  • golgi 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:cytosol, golgi, mitochondrion, peroxisome, plastid
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G069000.1 Wheat mitochondrion 94.16 92.36
TraesCS4A01G166700.1 Wheat mitochondrion 86.36 88.08
TraesCS5D01G081100.1 Wheat mitochondrion 87.66 66.5
Zm00001d048449_P001 Maize mitochondrion 65.58 59.41
Os02t0324700-01 Rice cytosol, mitochondrion 64.94 53.48
VIT_01s0011g05250.t01 Wine grape mitochondrion 38.96 43.17
PGSC0003DMT400016382 Potato mitochondrion 35.71 40.44
Solyc04g074100.2.1 Tomato mitochondrion 35.06 39.71
Solyc02g091540.2.1 Tomato endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 31.82 38.89
PGSC0003DMT400078657 Potato mitochondrion 31.82 38.58
KRH58638 Soybean mitochondrion 33.77 38.52
VIT_14s0006g01210.t01 Wine grape cytosol, mitochondrion 35.71 37.93
KRH42545 Soybean mitochondrion 33.12 37.23
KRH30944 Soybean cytosol 37.01 36.77
KRG97932 Soybean cytosol 35.71 36.67
Solyc04g007840.2.1 Tomato mitochondrion 33.12 35.42
PGSC0003DMT400075823 Potato mitochondrion 31.82 34.27
VIT_14s0006g02980.t01 Wine grape cytosol 24.03 33.95
CDX74563 Canola cytosol, nucleus, plastid 31.17 33.8
Bra028146.1-P Field mustard cytosol, nucleus, plastid 31.17 33.8
CDY01710 Canola cytosol, nucleus, plastid 30.52 33.1
AT5G37730.1 Thale cress cytosol 30.52 25.82
Protein Annotations
EMBL:AK375009EnsemblPlants:HORVU5Hr1G018240.1EnsemblPlantsGene:HORVU5Hr1G018240PANTHER:PTHR33270PANTHER:PTHR33270:SF5SEG:seg
UniParc:UPI000200894AUniProt:F2EFT2MapMan:35.2:::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EFT2]
Coordinates
chrchr5H:-:73481503..73482727
Molecular Weight (calculated)
16515.2 Da
IEP (calculated)
11.216
GRAVY (calculated)
0.056
Length
154 amino acids
Sequence
(BLAST)
001: MAVAVPSTLP MKLRRVEPRG KAAAAGVARV LVTVTVLGSA GPLRFLVDEG ESVNGLIRSA LRFYAREGRM PLLGADAANF LLYTANGRSD ALKSDERISF
101: NGCRSFMLWQ KTVADKNGSE PVVATTVNSS PGRKGIGGWK FGLNKILLNF SFKV
Best Arabidopsis Sequence Match ( AT1G70780.1 )
(BLAST)
001: MLLYNKQKKN QNAKGNRILI SVTVLGSAGP IRFVAYEDDL VASVIDTALK GYAREGRLPL LGSDFNDFLL YCPMVGPEAL STWDAIGSLG ARNFMLCRKP
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH
Arabidopsis Description
At1g70780 [Source:UniProtKB/TrEMBL;Acc:Q9S812]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.