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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 5
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol, mitochondrion, plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g074100.2.1 Tomato mitochondrion 87.5 87.5
PGSC0003DMT400075823 Potato mitochondrion 66.91 63.64
VIT_01s0011g05250.t01 Wine grape mitochondrion 64.71 63.31
KRH58638 Soybean mitochondrion 61.03 61.48
Bra016187.1-P Field mustard mitochondrion 57.35 59.54
CDX96277 Canola mitochondrion 57.35 59.54
CDY11545 Canola mitochondrion 57.35 59.54
KRH42545 Soybean mitochondrion 58.82 58.39
CDY71620 Canola cytosol, mitochondrion 58.82 57.97
CDY21419 Canola mitochondrion 58.82 57.97
AT1G23150.1 Thale cress cytosol, mitochondrion 58.82 56.74
Bra007943.1-P Field mustard mitochondrion 53.68 55.73
CDY03721 Canola mitochondrion 53.68 55.73
AT1G70780.1 Thale cress mitochondrion 57.35 55.71
CDY23481 Canola mitochondrion 57.35 55.71
CDX68330 Canola mitochondrion 56.62 54.23
Bra003942.1-P Field mustard mitochondrion 56.62 54.23
VIT_14s0006g02980.t01 Wine grape cytosol 43.38 54.13
CDY09482 Canola mitochondrion 53.68 54.07
CDX91699 Canola cytosol 57.35 53.06
PGSC0003DMT400078657 Potato mitochondrion 49.26 52.76
CDY41461 Canola cytosol 55.88 51.7
Bra016360.1-P Field mustard cytosol 55.88 51.7
Bra024566.1-P Field mustard cytosol 22.79 46.27
TraesCS4A01G166700.1 Wheat mitochondrion 41.18 37.09
HORVU5Hr1G018240.1 Barley mitochondrion 40.44 35.71
TraesCS5A01G069000.1 Wheat mitochondrion 41.18 35.67
Zm00001d048449_P001 Maize mitochondrion 41.91 33.53
Os02t0324700-01 Rice cytosol, mitochondrion 38.24 27.81
TraesCS5D01G081100.1 Wheat mitochondrion 39.71 26.6
Protein Annotations
EnsemblPlants:PGSC0003DMT400016382EnsemblPlantsGene:PGSC0003DMG400006403EntrezGene:102578189PANTHER:PTHR33270PANTHER:PTHR33270:SF5PGSC:PGSC0003DMG400006403
RefSeq:XP_006364850.1UniParc:UPI000296FA69UniProt:M1A7K8MapMan:35.2::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400006403]
Coordinates
chr4:+:63431404..63433432
Molecular Weight (calculated)
14894.0 Da
IEP (calculated)
10.339
GRAVY (calculated)
-0.252
Length
136 amino acids
Sequence
(BLAST)
001: MLLYKPKKNQ TGKGNRILIS ITVLGSAGPI RFVVNEEELV ADVIDTAMKA YAREGRLPVL GSDFSNFVLY CPSAGTEALG PWETIGSLGV RNFMLFKKSS
101: QGENTVDDGK QSPIRKGAGS WKTWFNKSIS RKIASH
Best Arabidopsis Sequence Match ( AT1G70780.1 )
(BLAST)
001: MLLYNKQKKN QNAKGNRILI SVTVLGSAGP IRFVAYEDDL VASVIDTALK GYAREGRLPL LGSDFNDFLL YCPMVGPEAL STWDAIGSLG ARNFMLCRKP
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH
Arabidopsis Description
At1g70780 [Source:UniProtKB/TrEMBL;Acc:Q9S812]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.