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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • plasma membrane 1
  • mitochondrion 4
  • cytosol 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, golgi, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
EpiLoc:plasma membrane
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol, golgi
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68330 Canola mitochondrion 99.3 99.3
CDY23481 Canola mitochondrion 92.25 93.57
Bra016187.1-P Field mustard mitochondrion 85.92 93.13
Bra007943.1-P Field mustard mitochondrion 82.39 89.31
AT1G70780.1 Thale cress mitochondrion 86.62 87.86
Bra016360.1-P Field mustard cytosol 68.31 65.99
VIT_01s0011g05250.t01 Wine grape mitochondrion 59.15 60.43
Solyc04g074100.2.1 Tomato mitochondrion 56.34 58.82
Bra024566.1-P Field mustard cytosol 27.46 58.21
KRH58638 Soybean mitochondrion 54.93 57.78
PGSC0003DMT400016382 Potato mitochondrion 54.23 56.62
KRH42545 Soybean mitochondrion 53.52 55.47
Solyc04g007840.2.1 Tomato mitochondrion 53.52 52.78
PGSC0003DMT400075823 Potato mitochondrion 51.41 51.05
VIT_14s0006g02980.t01 Wine grape cytosol 38.03 49.54
Bra024876.1-P Field mustard cytosol 47.18 46.85
Bra017444.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 42.96 45.52
Bra028146.1-P Field mustard cytosol, nucleus, plastid 36.62 36.62
Protein Annotations
EnsemblPlants:Bra003942.1EnsemblPlants:Bra003942.1-PEnsemblPlantsGene:Bra003942PANTHER:PTHR33270PANTHER:PTHR33270:SF14SEG:seg
UniParc:UPI00025418EEUniProt:M4CIA9MapMan:35.2:::
Description
AT1G70780 (E=3e-053) | unknown protein
Coordinates
chrA07:+:15882915..15883416
Molecular Weight (calculated)
15475.7 Da
IEP (calculated)
10.164
GRAVY (calculated)
-0.207
Length
142 amino acids
Sequence
(BLAST)
001: MLLYNKQKKN QNAKGNRILI SVTVLGSAGP IRFVAFEEDL VASVIDTALK CYAREGRLPL LGSDFNDFLL YCPMVGPEAL SAWSAIGSLG ARNFTLCRKP
101: EEKKVVKEGE GEGRSNSING ARKGGSLKAW INKSFNLKVS SH
Best Arabidopsis Sequence Match ( AT1G70780.1 )
(BLAST)
001: MLLYNKQKKN QNAKGNRILI SVTVLGSAGP IRFVAYEDDL VASVIDTALK GYAREGRLPL LGSDFNDFLL YCPMVGPEAL STWDAIGSLG ARNFMLCRKP
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH
Arabidopsis Description
At1g70780 [Source:UniProtKB/TrEMBL;Acc:Q9S812]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.