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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • peroxisome 2
  • mitochondrion 4
  • cytosol 1
  • golgi 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, golgi, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:plastid
EpiLoc:peroxisome
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:golgi, peroxisome, plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY03721 Canola mitochondrion 100.0 100.0
Bra016187.1-P Field mustard mitochondrion 91.6 91.6
Bra003942.1-P Field mustard mitochondrion 89.31 82.39
AT1G70780.1 Thale cress mitochondrion 84.73 79.29
Bra016360.1-P Field mustard cytosol 72.52 64.63
Bra024566.1-P Field mustard cytosol 29.01 56.72
Solyc04g074100.2.1 Tomato mitochondrion 58.02 55.88
VIT_01s0011g05250.t01 Wine grape mitochondrion 58.78 55.4
KRH58638 Soybean mitochondrion 56.49 54.81
PGSC0003DMT400016382 Potato mitochondrion 55.73 53.68
KRH42545 Soybean mitochondrion 54.96 52.55
Solyc04g007840.2.1 Tomato mitochondrion 55.73 50.69
PGSC0003DMT400075823 Potato mitochondrion 53.44 48.95
VIT_14s0006g02980.t01 Wine grape cytosol 39.69 47.71
Bra024876.1-P Field mustard cytosol 47.33 43.36
Bra017444.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 42.75 41.79
Bra028146.1-P Field mustard cytosol, nucleus, plastid 38.93 35.92
Protein Annotations
EnsemblPlants:Bra007943.1EnsemblPlants:Bra007943.1-PEnsemblPlantsGene:Bra007943PANTHER:PTHR33270PANTHER:PTHR33270:SF14UniParc:UPI0002546C19
UniProt:M4CUP8MapMan:35.2::::
Description
AT1G70780 (E=1e-052) | unknown protein
Coordinates
chrA02:-:12010013..12010503
Molecular Weight (calculated)
14483.7 Da
IEP (calculated)
10.227
GRAVY (calculated)
-0.171
Length
131 amino acids
Sequence
(BLAST)
001: MLLYNKQKKN AKGNRILISV TVLGSAGPIR FLAYEEDLVA SVIDTALKCY AREGRLPLLG SDFNDFILYC PMVGPESISA WKGIGSLGAR NFTLCRKPEE
101: KNKVVKEGDG ARKGSFKAWI NKSFSLRVST H
Best Arabidopsis Sequence Match ( AT1G70780.1 )
(BLAST)
001: MLLYNKQKKN QNAKGNRILI SVTVLGSAGP IRFVAYEDDL VASVIDTALK GYAREGRLPL LGSDFNDFLL YCPMVGPEAL STWDAIGSLG ARNFMLCRKP
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH
Arabidopsis Description
At1g70780 [Source:UniProtKB/TrEMBL;Acc:Q9S812]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.