Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17663 | Canola | cytosol | 100.0 | 100.0 |
| Bra017444.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 73.43 | 78.36 |
| Bra016187.1-P | Field mustard | mitochondrion | 47.55 | 51.91 |
| Bra007943.1-P | Field mustard | mitochondrion | 43.36 | 47.33 |
| Bra003942.1-P | Field mustard | mitochondrion | 46.85 | 47.18 |
| Bra016360.1-P | Field mustard | cytosol | 46.85 | 45.58 |
| Bra028146.1-P | Field mustard | cytosol, nucleus, plastid | 35.66 | 35.92 |
| Bra024566.1-P | Field mustard | cytosol | 15.38 | 32.84 |
Protein Annotations
Description
AT1G70780 (E=3e-029) | unknown protein
Coordinates
chrA06:-:24031751..24032266
Molecular Weight (calculated)
15971.2 Da
IEP (calculated)
10.500
GRAVY (calculated)
-0.325
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLYNNNNNN KQKKTHKSKI NRFLVSISFL GSAGPIRFVV KEDETVSNVI DYALKCYARE GRLPLLGSDS SFFLLYSPYY AVEAFNPWGK IGSTGSRNFV
101: LSKKLEAQNL GGSVDTSTTT IRKTSGKWKA WLNKSLGLMV PSH
101: LSKKLEAQNL GGSVDTSTTT IRKTSGKWKA WLNKSLGLMV PSH
001: MLLYNKQKKN QNAKGNRILI SVTVLGSAGP IRFVAYEDDL VASVIDTALK GYAREGRLPL LGSDFNDFLL YCPMVGPEAL STWDAIGSLG ARNFMLCRKP
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH
Arabidopsis Description
At1g70780 [Source:UniProtKB/TrEMBL;Acc:Q9S812]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.