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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • plasma membrane 1
  • mitochondrion 4
  • cytosol 2
  • peroxisome 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, golgi, mitochondrion, peroxisome, plasma membrane, plastid
BaCelLo:plastid
EpiLoc:plasma membrane
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol, golgi, peroxisome, plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11545 Canola mitochondrion 100.0 100.0
CDX96277 Canola mitochondrion 100.0 100.0
Bra007943.1-P Field mustard mitochondrion 91.6 91.6
Bra003942.1-P Field mustard mitochondrion 93.13 85.92
AT1G70780.1 Thale cress mitochondrion 90.84 85.0
Bra016360.1-P Field mustard cytosol 77.1 68.71
Bra024566.1-P Field mustard cytosol 32.06 62.69
VIT_01s0011g05250.t01 Wine grape mitochondrion 64.12 60.43
Solyc04g074100.2.1 Tomato mitochondrion 61.83 59.56
KRH58638 Soybean mitochondrion 60.31 58.52
PGSC0003DMT400016382 Potato mitochondrion 59.54 57.35
KRH42545 Soybean mitochondrion 58.78 56.2
Solyc04g007840.2.1 Tomato mitochondrion 59.54 54.17
PGSC0003DMT400075823 Potato mitochondrion 57.25 52.45
VIT_14s0006g02980.t01 Wine grape cytosol 42.75 51.38
Bra024876.1-P Field mustard cytosol 51.91 47.55
Bra017444.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 47.33 46.27
Bra028146.1-P Field mustard cytosol, nucleus, plastid 40.46 37.32
Protein Annotations
EnsemblPlants:Bra016187.1EnsemblPlants:Bra016187.1-PEnsemblPlantsGene:Bra016187PANTHER:PTHR33270PANTHER:PTHR33270:SF14SEG:seg
UniParc:UPI00025412C9UniProt:M4DI60MapMan:35.2:::
Description
AT1G70780 (E=1e-055) | unknown protein
Coordinates
chrA07:-:18992289..18992768
Molecular Weight (calculated)
14325.5 Da
IEP (calculated)
10.202
GRAVY (calculated)
-0.106
Length
131 amino acids
Sequence
(BLAST)
001: MLLYNKQKKN AKGNRILISV TVLGSAGPIR FVAYEDDLVA SVIDTALKCY AREGRLPLLG SDFNDFLLYC PMVGPEALSA WNAIGSLGAR NFTLCKKPEE
101: KKVVKEGNGA RKGGSFKAWI NKSFSLKVST H
Best Arabidopsis Sequence Match ( AT1G70780.1 )
(BLAST)
001: MLLYNKQKKN QNAKGNRILI SVTVLGSAGP IRFVAYEDDL VASVIDTALK GYAREGRLPL LGSDFNDFLL YCPMVGPEAL STWDAIGSLG ARNFMLCRKP
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH
Arabidopsis Description
At1g70780 [Source:UniProtKB/TrEMBL;Acc:Q9S812]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.