Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0011g05250.t01 | Wine grape | mitochondrion | 71.56 | 56.12 |
| Solyc04g074100.2.1 | Tomato | mitochondrion | 56.88 | 45.59 |
| KRH42545 | Soybean | mitochondrion | 55.05 | 43.8 |
| PGSC0003DMT400016382 | Potato | mitochondrion | 54.13 | 43.38 |
| Bra016187.1-P | Field mustard | mitochondrion | 51.38 | 42.75 |
| CDX96277 | Canola | mitochondrion | 51.38 | 42.75 |
| CDY11545 | Canola | mitochondrion | 51.38 | 42.75 |
| Solyc04g007840.2.1 | Tomato | mitochondrion | 55.96 | 42.36 |
| KRH58638 | Soybean | mitochondrion | 52.29 | 42.22 |
| VIT_14s0006g01210.t01 | Wine grape | cytosol, mitochondrion | 55.05 | 41.38 |
| PGSC0003DMT400075823 | Potato | mitochondrion | 52.29 | 39.86 |
| AT1G23150.1 | Thale cress | cytosol, mitochondrion | 51.38 | 39.72 |
| Bra007943.1-P | Field mustard | mitochondrion | 47.71 | 39.69 |
| CDY03721 | Canola | mitochondrion | 47.71 | 39.69 |
| AT1G70780.1 | Thale cress | mitochondrion | 49.54 | 38.57 |
| CDY09482 | Canola | mitochondrion | 47.71 | 38.52 |
| CDY71620 | Canola | cytosol, mitochondrion | 48.62 | 38.41 |
| CDX68330 | Canola | mitochondrion | 49.54 | 38.03 |
| Bra003942.1-P | Field mustard | mitochondrion | 49.54 | 38.03 |
| CDY23481 | Canola | mitochondrion | 48.62 | 37.86 |
| CDY21419 | Canola | mitochondrion | 47.71 | 37.68 |
| CDY41461 | Canola | cytosol | 48.62 | 36.05 |
| Bra016360.1-P | Field mustard | cytosol | 48.62 | 36.05 |
| CDX91699 | Canola | cytosol | 47.71 | 35.37 |
| TraesCS4A01G166700.1 | Wheat | mitochondrion | 34.86 | 25.17 |
| TraesCS5A01G069000.1 | Wheat | mitochondrion | 34.86 | 24.2 |
| HORVU5Hr1G018240.1 | Barley | mitochondrion | 33.95 | 24.03 |
| Bra024566.1-P | Field mustard | cytosol | 13.76 | 22.39 |
| Zm00001d048449_P001 | Maize | mitochondrion | 33.95 | 21.76 |
| Os02t0324700-01 | Rice | cytosol, mitochondrion | 34.86 | 20.32 |
| TraesCS5D01G081100.1 | Wheat | mitochondrion | 34.86 | 18.72 |
Protein Annotations
| ArrayExpress:VIT_14s0006g02980 | EMBL:FN596245 | EnsemblPlants:VIT_14s0006g02980.t01 | EnsemblPlantsGene:VIT_14s0006g02980 | PANTHER:PTHR33270 | PANTHER:PTHR33270:SF5 |
| ProteinID:CCB57717 | ProteinID:CCB57717.1 | UniParc:UPI0002108893 | UniProt:F6HSE0 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr14:+:21283363..21283782
Molecular Weight (calculated)
12173.7 Da
IEP (calculated)
8.939
GRAVY (calculated)
-0.188
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLYKQKKNQ SVGKDNRFLI SINVLGSVGL IRFIVNKDEL AATVIDTTLK SYACEGRLPI LDSNLNNFLY CSNAESDALN LWETIGSNGS RNVILCKKPQ
101: LQKDYRSGC
101: LQKDYRSGC
001: MLLYNKQKKN QNAKGNRILI SVTVLGSAGP IRFVAYEDDL VASVIDTALK GYAREGRLPL LGSDFNDFLL YCPMVGPEAL STWDAIGSLG ARNFMLCRKP
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH
Arabidopsis Description
At1g70780 [Source:UniProtKB/TrEMBL;Acc:Q9S812]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.