CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42545	Soybean	mitochondrion	83.7	82.48
VIT_01s0011g05250.t01	Wine grape	mitochondrion	65.19	63.31
Solyc04g074100.2.1	Tomato	mitochondrion	62.22	61.76
PGSC0003DMT400016382	Potato	mitochondrion	61.48	61.03
CDX96277	Canola	mitochondrion	58.52	60.31
CDY11545	Canola	mitochondrion	58.52	60.31
Bra016187.1-P	Field mustard	mitochondrion	58.52	60.31
PGSC0003DMT400075823	Potato	mitochondrion	62.96	59.44
Solyc04g007840.2.1	Tomato	mitochondrion	60.74	56.94
CDY03721	Canola	mitochondrion	54.81	56.49
Bra007943.1-P	Field mustard	mitochondrion	54.81	56.49
AT1G70780.1	Thale cress	mitochondrion	58.52	56.43
CDX68330	Canola	mitochondrion	57.78	54.93
Bra003942.1-P	Field mustard	mitochondrion	57.78	54.93
CDY09482	Canola	mitochondrion	54.07	54.07
CDY23481	Canola	mitochondrion	55.56	53.57
AT1G23150.1	Thale cress	cytosol, mitochondrion	55.56	53.19
CDY71620	Canola	cytosol, mitochondrion	54.07	52.9
CDX91699	Canola	cytosol	57.04	52.38
VIT_14s0006g02980.t01	Wine grape	cytosol	42.22	52.29
CDY21419	Canola	mitochondrion	52.59	51.45
CDY41461	Canola	cytosol	54.81	50.34
Bra016360.1-P	Field mustard	cytosol	54.81	50.34
KRG97932	Soybean	cytosol	55.56	50.0
KRH30944	Soybean	cytosol	56.3	49.03
Bra024566.1-P	Field mustard	cytosol	21.48	43.28
Zm00001d048449_P001	Maize	mitochondrion	42.96	34.12
TraesCS4A01G166700.1	Wheat	mitochondrion	37.78	33.77
HORVU5Hr1G018240.1	Barley	mitochondrion	38.52	33.77
TraesCS5A01G069000.1	Wheat	mitochondrion	38.52	33.12
Os02t0324700-01	Rice	cytosol, mitochondrion	41.48	29.95
TraesCS5D01G081100.1	Wheat	mitochondrion	37.04	24.63

Protein Annotations

EMBL:ACUP02003279	EnsemblPlants:KRH58638	EnsemblPlantsGene:GLYMA_05G140600	PANTHER:PTHR33270	PANTHER:PTHR33270:SF5	ProteinID:KRH58638
ProteinID:KRH58638.1	UniParc:UPI0001BA820A	UniProt:I1K3E6	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr5:-:33351680..33353411

Molecular Weight (calculated)

14726.8 Da

IEP (calculated)

10.680

GRAVY (calculated)

-0.177

Length

135 amino acids

Sequence
(BLAST)

001: MLTMSKQKKN QNAKRLLISI NVLGSAGPIR FVVNEEELVA AVIDTALKSY AREGRLPVLG NNTTGFVLYC PHLGSDALSP WERIGSHGVR NFVLFKKPEG
101: VADVDGSTAL SRSSRGSGSW KAWFNKSLNL KISTH

Best Arabidopsis Sequence Match ( AT1G70780.1 )
(BLAST)

001: MLLYNKQKKN QNAKGNRILI SVTVLGSAGP IRFVAYEDDL VASVIDTALK GYAREGRLPL LGSDFNDFLL YCPMVGPEAL STWDAIGSLG ARNFMLCRKP
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH

Arabidopsis Description

At1g70780 [Source:UniProtKB/TrEMBL;Acc:Q9S812]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.