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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
  • cytosol 1
  • peroxisome 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, golgi, mitochondrion, peroxisome, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:golgi, peroxisome, plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400075823 Potato mitochondrion 82.64 83.22
Solyc04g074100.2.1 Tomato mitochondrion 65.97 69.85
VIT_01s0011g05250.t01 Wine grape mitochondrion 63.19 65.47
KRH58638 Soybean mitochondrion 56.94 60.74
Bra016187.1-P Field mustard mitochondrion 54.17 59.54
CDX96277 Canola mitochondrion 54.17 59.54
CDY11545 Canola mitochondrion 54.17 59.54
KRH42545 Soybean mitochondrion 55.56 58.39
VIT_14s0006g02980.t01 Wine grape cytosol 42.36 55.96
Bra007943.1-P Field mustard mitochondrion 50.69 55.73
CDY03721 Canola mitochondrion 50.69 55.73
CDY23481 Canola mitochondrion 53.47 55.0
CDY09482 Canola mitochondrion 51.39 54.81
AT1G70780.1 Thale cress mitochondrion 52.78 54.29
AT1G23150.1 Thale cress cytosol, mitochondrion 52.78 53.9
CDX68330 Canola mitochondrion 52.78 53.52
Bra003942.1-P Field mustard mitochondrion 52.78 53.52
Solyc02g091540.2.1 Tomato endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 45.14 51.59
CDY71620 Canola cytosol, mitochondrion 49.31 51.45
CDY21419 Canola mitochondrion 48.61 50.72
CDX91699 Canola cytosol 50.0 48.98
CDY41461 Canola cytosol 49.31 48.3
Bra016360.1-P Field mustard cytosol 49.31 48.3
Bra024566.1-P Field mustard cytosol 18.06 38.81
TraesCS4A01G166700.1 Wheat mitochondrion 35.42 33.77
HORVU5Hr1G018240.1 Barley mitochondrion 35.42 33.12
TraesCS5A01G069000.1 Wheat mitochondrion 35.42 32.48
Zm00001d048449_P001 Maize mitochondrion 35.42 30.0
Os02t0324700-01 Rice cytosol, mitochondrion 34.03 26.2
TraesCS5D01G081100.1 Wheat mitochondrion 35.42 25.12
Protein Annotations
EnsemblPlants:Solyc04g007840.2.1EnsemblPlantsGene:Solyc04g007840.2PANTHER:PTHR33270PANTHER:PTHR33270:SF5UniParc:UPI0002766BB4UniProt:K4BNU1
MapMan:35.2:::::
Description
No Description!
Coordinates
chr4:-:1515366..1517843
Molecular Weight (calculated)
16065.7 Da
IEP (calculated)
10.648
GRAVY (calculated)
-0.109
Length
144 amino acids
Sequence
(BLAST)
001: MVLYKTKKIQ AGKGNRLLIS ITVVGSAGPI RFVVNEKELV ADVIDIALKN YAREERLPVL GSNFNNFVLY CPTAVTEDLS PWETIGSLGV RNFVLVKKPQ
101: SENPILNGKQ QRILDGKQVV MARKGSGSWK AWFNKSLSRK IVSY
Best Arabidopsis Sequence Match ( AT1G70780.1 )
(BLAST)
001: MLLYNKQKKN QNAKGNRILI SVTVLGSAGP IRFVAYEDDL VASVIDTALK GYAREGRLPL LGSDFNDFLL YCPMVGPEAL STWDAIGSLG ARNFMLCRKP
101: EEKKVEESNG RSDSTINGAR KGGSLKAWIN KSFNLKVSSH
Arabidopsis Description
At1g70780 [Source:UniProtKB/TrEMBL;Acc:Q9S812]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.