Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, cytosol, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 3
- cytosol 1
- peroxisome 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04091 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 100.0 | 100.0 |
| CDY17461 | Canola | cytosol, mitochondrion, nucleus | 92.54 | 92.54 |
| Bra024876.1-P | Field mustard | cytosol | 78.36 | 73.43 |
| Bra016187.1-P | Field mustard | mitochondrion | 46.27 | 47.33 |
| Bra003942.1-P | Field mustard | mitochondrion | 45.52 | 42.96 |
| Bra007943.1-P | Field mustard | mitochondrion | 41.79 | 42.75 |
| Bra016360.1-P | Field mustard | cytosol | 44.03 | 40.14 |
| Bra028146.1-P | Field mustard | cytosol, nucleus, plastid | 37.31 | 35.21 |
| Bra024566.1-P | Field mustard | cytosol | 14.93 | 29.85 |
Protein Annotations
Description
AT1G70780 (E=1e-031) | unknown protein
Coordinates
chrA09:-:15433678..15434164
Molecular Weight (calculated)
14812.9 Da
IEP (calculated)
10.073
GRAVY (calculated)
-0.202
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MVYNKQKKAH KSKINKFLVS ISFIGSAGPI RFVVKEDETV SHVIEYALKC YAREGRLPLL GSDSSYFLLY CPYCAAEAFN PCGKIGSIGS RNFVLSKKSD
101: AQSLGDSVGT TTRKISGRWK AWLNKSLGLM DPSH
101: AQSLGDSVGT TTRKISGRWK AWLNKSLGLM DPSH
001: MLYNNKHQRN QKSKTTNRFL VSINVLGSAG FHFSDQIPAF SDFIALTVPL KGKIGSTGSR NFVLSNKLET QNLEDSMMTT TTTRKTSGRW KAWLNKSFGL
101: MVPSH
101: MVPSH
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 30201 Blast hits to 17322 /.../ins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT2G01554]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.