Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74563 | Canola | cytosol, nucleus, plastid | 100.0 | 100.0 |
| AT5G37730.1 | Thale cress | cytosol | 64.79 | 50.55 |
| Bra016187.1-P | Field mustard | mitochondrion | 37.32 | 40.46 |
| Bra007943.1-P | Field mustard | mitochondrion | 35.92 | 38.93 |
| Bra017444.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 35.21 | 37.31 |
| Bra016360.1-P | Field mustard | cytosol | 38.03 | 36.73 |
| Bra003942.1-P | Field mustard | mitochondrion | 36.62 | 36.62 |
| Bra024876.1-P | Field mustard | cytosol | 35.92 | 35.66 |
| HORVU5Hr1G018240.1 | Barley | mitochondrion | 33.8 | 31.17 |
| TraesCS4A01G166700.1 | Wheat | mitochondrion | 33.1 | 31.13 |
| TraesCS5A01G069000.1 | Wheat | mitochondrion | 33.1 | 29.94 |
| Zm00001d048449_P001 | Maize | mitochondrion | 34.51 | 28.82 |
| Os02t0324700-01 | Rice | cytosol, mitochondrion | 34.51 | 26.2 |
| Bra024566.1-P | Field mustard | cytosol | 11.27 | 23.88 |
| TraesCS5D01G081100.1 | Wheat | mitochondrion | 31.69 | 22.17 |
Protein Annotations
Description
AT5G37730 (E=1e-048) | unknown protein
Coordinates
chrA04:-:6114635..6115267
Molecular Weight (calculated)
16186.6 Da
IEP (calculated)
10.749
GRAVY (calculated)
-0.626
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEPKKKILV SVNVLGSVGP IRFLVNEDDK VSSVINTALK TYARQGRIPV LGFDVNNFIF YSNSAGFKTL NPQEKIGSMG ETNFLLCKRE REPLEKVEGR
101: EESKAREGKG WKNRLRRSLL GEFLYKNKSN STKVARTRSL YQ
101: EESKAREGKG WKNRLRRSLL GEFLYKNKSN STKVARTRSL YQ
001: MNRNENVKGV MKRKNKKLLV SVNVLGSVGP IRFLANEDDE VSSAINTTLK AYARQGRIPV LGFDVDNFIF YSINAGFNTL HPQEKIGSMD VTNFLMCKKE
101: PRPLEKVEGI RESRARIGHG WKTTHLLRFL LGYIPYNHKP NSTSQMDYRS FGDGNAYCIE EYQQEFQRIT KIKEYQREFQ RF
101: PRPLEKVEGI RESRARIGHG WKTTHLLRFL LGYIPYNHKP NSTSQMDYRS FGDGNAYCIE EYQQEFQRIT KIKEYQREFQ RF
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FHP8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.