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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • mitochondrion 2
  • cytosol 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, peroxisome, plastid
Any Predictor:cytosol, golgi, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:golgi
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66275 Canola cytosol, peroxisome, plasma membrane 79.96 87.76
Bra022441.1-P Field mustard cytosol 79.75 87.53
Bra038223.1-P Field mustard cytosol, golgi, peroxisome 75.0 78.91
CDY42196 Canola cytosol 74.17 78.73
CDX95430 Canola cytosol, golgi, peroxisome 73.76 78.46
KRH77919 Soybean cytosol 58.47 72.01
KRH27585 Soybean cytosol 58.06 70.43
VIT_03s0091g01190.t01 Wine grape cytosol 66.32 64.07
Solyc01g106900.2.1 Tomato cytosol, peroxisome, plastid 64.26 62.45
PGSC0003DMT400066130 Potato cytosol, peroxisome, plastid 64.05 62.25
GSMUA_Achr5P01890_001 Banana nucleus 55.58 54.34
Zm00001d012102_P001 Maize mitochondrion 49.17 53.72
EES04071 Sorghum mitochondrion 48.97 53.5
CDY58861 Canola nucleus 80.58 53.42
Zm00001d042441_P001 Maize mitochondrion 48.35 52.82
Os01t0908500-01 Rice plasma membrane 48.35 52.7
TraesCS3B01G448800.1 Wheat mitochondrion 48.76 52.56
HORVU3Hr1G092200.1 Barley mitochondrion 48.55 52.46
TraesCS3A01G414000.1 Wheat mitochondrion 48.76 52.33
TraesCS3D01G408500.1 Wheat mitochondrion 48.55 52.22
OQU81611 Sorghum peroxisome, plasma membrane, plastid 13.43 51.18
KXG25477 Sorghum plastid 37.4 50.42
TraesCS3D01G373700.1 Wheat mitochondrion 41.94 50.12
TraesCS3B01G413200.1 Wheat mitochondrion 41.74 49.88
TraesCS3A01G380600.1 Wheat mitochondrion 41.74 49.88
HORVU3Hr1G082870.5 Barley mitochondrion 41.53 49.51
EES01822 Sorghum mitochondrion 41.53 48.55
TraesCS3B01G413100.1 Wheat cytosol, nucleus, plastid, vacuole 40.7 48.4
TraesCS3D01G373600.1 Wheat mitochondrion 40.29 47.91
Zm00001d003666_P001 Maize mitochondrion 39.88 47.89
Os01t0869200-01 Rice mitochondrion, plastid 40.91 47.37
TraesCS3A01G380500.1 Wheat mitochondrion 39.67 47.06
EES10822 Sorghum mitochondrion 40.5 46.56
HORVU3Hr1G082880.2 Barley cytosol, mitochondrion, peroxisome, vacuole 39.67 45.82
KXG34188 Sorghum plasma membrane 13.84 45.27
Os04t0430900-00 Rice cytosol, plastid 39.67 45.07
Zm00001d025416_P001 Maize mitochondrion 36.98 44.97
AT5G64560.1 Thale cress cytosol 36.36 44.67
AT1G80900.1 Thale cress cytosol, nucleus, peroxisome, plastid 40.5 44.24
AT1G16010.2 Thale cress plastid 40.29 44.12
AT5G09690.2 Thale cress cytosol 35.33 43.07
AT2G03620.2 Thale cress cytosol, nucleus, peroxisome 34.92 40.14
AT5G09720.2 Thale cress cytosol 24.17 39.8
AT3G58970.1 Thale cress mitochondrion, plastid 33.68 37.39
AT4G28580.1 Thale cress mitochondrion, plastid 26.86 31.86
AT5G22830.1 Thale cress plastid 17.15 18.08
Protein Annotations
Gene3D:1.20.58.340Gene3D:2.40.128.330MapMan:24.3.3.1EntrezGene:821501UniProt:A0A178VLJ7ProteinID:AEE76270.1
ArrayExpress:AT3G19640EnsemblPlantsGene:AT3G19640RefSeq:AT3G19640TAIR:AT3G19640RefSeq:AT3G19640-TAIR-GEnsemblPlants:AT3G19640.1
TAIR:AT3G19640.1EMBL:AY150288Unigene:At.20611ProteinID:BAB02549.1EMBL:BT000458EMBL:BT006622
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810
GO:GO:0006811GO:GO:0008150GO:GO:0015095GO:GO:0016020GO:GO:0016021GO:GO:1903830
Symbol:MGT4RefSeq:NP_188598.2ProteinID:OAP06598.1PO:PO:0000013PO:PO:0000014PO:PO:0000017
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0003015PO:PO:0004507PO:PO:0006085PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009001PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0009067PO:PO:0020030PO:PO:0020031PO:PO:0020038
PO:PO:0020100PO:PO:0020121PO:PO:0020137PO:PO:0025022PO:PO:0025257PO:PO:0025281
PANTHER:PTHR13890PANTHER:PTHR13890:SF4UniProt:Q9LJN2TMHMM:TMhelixUniParc:UPI00000AC231SEG:seg
Description
MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
Coordinates
chr3:+:6820926..6823467
Molecular Weight (calculated)
53461.2 Da
IEP (calculated)
4.820
GRAVY (calculated)
-0.460
Length
484 amino acids
Sequence
(BLAST)
001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.