Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26960 | Canola | plastid | 87.8 | 87.99 |
| CDX92333 | Canola | plastid | 88.89 | 87.74 |
| Bra002432.1-P | Field mustard | plastid | 89.11 | 87.58 |
| GSMUA_Achr7P01670_001 | Banana | cytosol | 23.75 | 73.15 |
| VIT_06s0061g01060.t01 | Wine grape | plastid | 67.97 | 69.96 |
| Solyc11g066660.1.1 | Tomato | plastid | 65.14 | 66.89 |
| KRH22756 | Soybean | mitochondrion, plastid | 66.23 | 66.67 |
| KRH26555 | Soybean | plastid | 66.23 | 66.52 |
| HORVU4Hr1G004120.2 | Barley | plastid | 61.66 | 65.36 |
| TraesCS4D01G025300.1 | Wheat | plastid | 61.22 | 62.86 |
| TraesCS4A01G286400.1 | Wheat | plastid | 61.22 | 62.72 |
| TraesCS4B01G027800.1 | Wheat | plastid | 61.22 | 62.72 |
| PGSC0003DMT400001226 | Potato | mitochondrion | 52.51 | 61.48 |
| OQU91190 | Sorghum | plastid | 61.22 | 60.69 |
| Os03t0684400-01 | Rice | plastid | 62.09 | 60.13 |
| GSMUA_Achr8P03230_001 | Banana | mitochondrion | 63.18 | 58.59 |
| Zm00001d033527_P001 | Maize | plastid | 60.35 | 54.74 |
| GSMUA_Achr7P01660_001 | Banana | plastid | 32.03 | 49.0 |
| AT5G09690.2 | Thale cress | cytosol | 20.26 | 23.43 |
| AT5G64560.1 | Thale cress | cytosol | 19.83 | 23.1 |
| AT1G16010.2 | Thale cress | plastid | 21.13 | 21.95 |
| AT1G80900.1 | Thale cress | cytosol, nucleus, peroxisome, plastid | 20.91 | 21.67 |
| AT5G09720.2 | Thale cress | cytosol | 13.07 | 20.41 |
| AT2G03620.2 | Thale cress | cytosol, nucleus, peroxisome | 18.3 | 19.95 |
| AT3G58970.1 | Thale cress | mitochondrion, plastid | 16.99 | 17.89 |
| AT3G19640.1 | Thale cress | cytosol, golgi, peroxisome, plastid | 18.08 | 17.15 |
| AT4G28580.1 | Thale cress | mitochondrion, plastid | 14.38 | 16.18 |
Protein Annotations
| Gene3D:1.20.58.340 | Gene3D:2.40.128.330 | MapMan:24.3.3.1 | EntrezGene:832346 | UniProt:A0A178ULQ2 | ProteinID:AED93085.1 |
| EMBL:AF322255 | ProteinID:ANM70562.1 | ArrayExpress:AT5G22830 | EnsemblPlantsGene:AT5G22830 | RefSeq:AT5G22830 | TAIR:AT5G22830 |
| RefSeq:AT5G22830-TAIR-G | EnsemblPlants:AT5G22830.1 | TAIR:AT5G22830.1 | Symbol:ATMGT10 | ProteinID:BAB10604.1 | EMBL:BT029184 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009628 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010027 | GO:GO:0010117 | GO:GO:0010960 |
| GO:GO:0015095 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0030001 | GO:GO:0031969 |
| GO:GO:0046873 | GO:GO:0055085 | GO:GO:1903830 | InterPro:MgTranspt_CorA/ZnTranspt_ZntB | RefSeq:NP_001332159.1 | RefSeq:NP_568424.1 |
| ProteinID:OAO94643.1 | PFAM:PF01544 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000017 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR13890 |
| PANTHER:PTHR13890:SF25 | UniProt:Q058N4 | TMHMM:TMhelix | UniParc:UPI0000162564 | SEG:seg | : |
Description
MRS2-11MRS2-11 [Source:UniProtKB/TrEMBL;Acc:A0A178ULQ2]
Coordinates
chr5:+:7627597..7630993
Molecular Weight (calculated)
51096.2 Da
IEP (calculated)
4.995
GRAVY (calculated)
-0.183
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTPIPSTF TSLFNFSDHS PYPSPSLHYL LPGSSPSFSL QLSALSRTPI YFEALKVLSR SKCFAKSPTT AEDFVGDYES LNVSDDDDGS DSNSSDGDNG
101: GGRDDSKKID SSSSSSSSDS TSLGIREPVY EVVEVKATGA ISTRKINRRQ LLKSSGLRPR DIRSVDPSLF MTNSVPSLLV REHAILLNLG SLRAIAMRDR
201: VLIFDYNRRG GRAFVDTLMP RLNPRSMNGG PSMPFELEAV ESALISRIQR LEQRLMDIEP RVQALLEVLP NRLTADILEE LRISKQRLVE LGSRAGALRQ
301: MLLDLLEDPH EIRRICIMGR NCTLRRGDDD LECTLPSDKL IAEEEEEEIE MLLENYLQRC ESCHGQAERL LDSAKEMEDS IAVNLSSRRL EVSRFELLLQ
401: VGTFCVAVGA LIAGIFGMNL RSYLEEQASA FWLTTGGIII GAAVAFFLMY SYLSRRKIF
101: GGRDDSKKID SSSSSSSSDS TSLGIREPVY EVVEVKATGA ISTRKINRRQ LLKSSGLRPR DIRSVDPSLF MTNSVPSLLV REHAILLNLG SLRAIAMRDR
201: VLIFDYNRRG GRAFVDTLMP RLNPRSMNGG PSMPFELEAV ESALISRIQR LEQRLMDIEP RVQALLEVLP NRLTADILEE LRISKQRLVE LGSRAGALRQ
301: MLLDLLEDPH EIRRICIMGR NCTLRRGDDD LECTLPSDKL IAEEEEEEIE MLLENYLQRC ESCHGQAERL LDSAKEMEDS IAVNLSSRRL EVSRFELLLQ
401: VGTFCVAVGA LIAGIFGMNL RSYLEEQASA FWLTTGGIII GAAVAFFLMY SYLSRRKIF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.