Factsheet for PGSC0003DMT400001226

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g066660.1.1	Tomato	plastid	91.33	80.09
GSMUA_Achr7P01670_001	Banana	cytosol	26.02	68.46
VIT_06s0061g01060.t01	Wine grape	plastid	65.56	57.62
KRH22756	Soybean	mitochondrion, plastid	63.01	54.17
KRH26555	Soybean	plastid	63.01	54.05
CDY26960	Canola	plastid	61.73	52.84
AT5G22830.1	Thale cress	plastid	61.48	52.51
HORVU4Hr1G004120.2	Barley	plastid	57.4	51.96
CDX92333	Canola	plastid	61.48	51.83
Bra002432.1-P	Field mustard	plastid	61.73	51.82
TraesCS4D01G025300.1	Wheat	plastid	57.4	50.34
TraesCS4B01G027800.1	Wheat	plastid	57.4	50.22
TraesCS4A01G286400.1	Wheat	plastid	57.4	50.22
Os03t0684400-01	Rice	plastid	58.16	48.1
OQU91190	Sorghum	plastid	55.87	47.3
GSMUA_Achr8P03230_001	Banana	mitochondrion	57.65	45.66
Zm00001d033527_P001	Maize	plastid	55.61	43.08
GSMUA_Achr7P01660_001	Banana	plastid	24.49	32.0
PGSC0003DMT400038974	Potato	cytosol	7.14	19.18
PGSC0003DMT400072765	Potato	cytosol, peroxisome, plasma membrane	9.44	18.69
PGSC0003DMT400073310	Potato	nucleus, peroxisome, plasma membrane, plastid	19.9	17.53
PGSC0003DMT400038981	Potato	mitochondrion	16.84	17.51
PGSC0003DMT400064171	Potato	nucleus	16.58	15.05
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	18.11	14.26

Protein Annotations

Gene3D:1.20.58.340	MapMan:24.3.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0009628	GO:GO:0009941	GO:GO:0009987	GO:GO:0010027	GO:GO:0010117
GO:GO:0010960	GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0030001
GO:GO:0046873	GO:GO:0055085	GO:GO:1903830	UniProt:M0ZI43	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544
EnsemblPlantsGene:PGSC0003DMG401000463	PGSC:PGSC0003DMG401000463	EnsemblPlants:PGSC0003DMT400001226	PANTHER:PTHR13890	PANTHER:PTHR13890:SF25	SUPFAM:SSF144083
TMHMM:TMhelix	UniParc:UPI0002955B28	SEG:seg	:	:	:

Description

Magnesium transporter MRS2-11, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG401000463]

Coordinates

chr11:-:39513618..39523616

Molecular Weight (calculated)

43741.7 Da

IEP (calculated)

4.733

GRAVY (calculated)

-0.041

Length

392 amino acids

Sequence
(BLAST)

001: MAANAPYLLQ LPVRSPEFRV LITGGYAIVR SRMEFPFSCK NYATSLRARK VRVVECVAKS TELEALVKDG GDDDNDDGDG VRGDDDKVVT HGDSVSSQRS
101: ASASSGDSLS LGIREPVYEI AHQKDPDIVF SFLGGKAFID SLLPRLNPTT TNGGPSMPFV LEVVEAALHS RIQRLEHRLW DLEPRVQALL EVLPNRLTAD
201: ILEELRISKQ KLVELGSRAG ALKQMLLDIL EDTHEIRHIC IIGRNCVLKK ENDEIECSVP LDKEIAEEEE EEIEMLLENY LQRLSIDAIS TLCESCHGQA
301: ERLLDSAKEM EDSIAVNLSS RRLEVSRFEL ILQVGTFCVA AGALVAGIFG MNLRSYLEEH VFAFWLTTAG IIVGAVLAFY LMYWYLRTRK IL

Best Arabidopsis Sequence Match ( AT5G22830.2 )
(BLAST)

001: MALTPIPSTF TSLFNFSDHS PYPSPSLHYL LPGSSPSFSL QLSALSRTPI YFEALKVLSR SKCFAKSPTT AEDFVGDYES LNVSDDDDGS DSNSSDGDNG
101: GGRDDSKKID SSSSSSSSDS TSLGIREPVY EVVEVKATGA ISTRKINRRQ LLKSSGLRPR DIRSVDPSLF MTNSVPSLLV REHAILLNLG SLRAIAMRDR
201: VLIFDYNRRG GRAFVDTLMP RLNPRSMNGG PSMPFELEAV ESALISRIQR LEQRLMDIEP RVQALLEVLP NRLTADILEE LRISKQRLVE LGSRAGALRQ
301: MLLDLLEDPH EIRRICIMGR NCTLRRGDDD LECTLPSDKL IAEEEEEEIE MLLENYLQRC ESCHGQAERL LDSAKEMEDS IAVNLSSRRL EVSRFELLLQ
401: VGTFCVAVGA LIAGIFGMNL RSYLEEQASA FWLTTGGIII GAAVAFFLMY SYLSRRKIF

Arabidopsis Description

MRS2-11MRS2-11 [Source:UniProtKB/TrEMBL;Acc:A0A178ULQ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.