Factsheet for PGSC0003DMT400072765

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plastid 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g012220.2.1	Tomato	cytosol, peroxisome, plasma membrane	96.46	46.02
PGSC0003DMT400038974	Potato	cytosol	26.77	36.3
VIT_01s0011g00450.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	67.68	31.83
AT2G03620.2	Thale cress	cytosol, nucleus, peroxisome	65.66	30.88
Bra025121.1-P	Field mustard	cytosol, nucleus, peroxisome	65.66	30.88
CDY02984	Canola	cytosol, peroxisome, plasma membrane	65.15	30.64
CDY36615	Canola	cytosol, nucleus, peroxisome	65.15	30.64
CDY51207	Canola	cytosol, nucleus, peroxisome	65.15	30.64
KRH70907	Soybean	cytosol, nucleus, plasma membrane	60.1	28.74
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	59.6	28.5
PGSC0003DMT400073310	Potato	nucleus, peroxisome, plasma membrane, plastid	55.05	24.49
PGSC0003DMT400038981	Potato	mitochondrion	33.33	17.51
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	35.86	14.26
PGSC0003DMT400064171	Potato	nucleus	28.79	13.19
PGSC0003DMT400001226	Potato	mitochondrion	18.69	9.44

Protein Annotations

Gene3D:1.20.58.340	MapMan:24.3.3.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
GO:GO:0055085	UniProt:M1CQX2	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544	EnsemblPlantsGene:PGSC0003DMG400028316	PGSC:PGSC0003DMG400028316
EnsemblPlants:PGSC0003DMT400072765	PANTHER:PTHR13890	PANTHER:PTHR13890:SF11	SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI00029510DD
SEG:seg	:	:	:	:	:

Description

Magnesium transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400028316]

Coordinates

chr5:-:557450..563263

Molecular Weight (calculated)

22136.5 Da

IEP (calculated)

4.505

GRAVY (calculated)

0.006

Length

198 amino acids

Sequence
(BLAST)

001: MDDDGDMAEM YLTEKKQRKE DYFNNDSYDQ ADIYGKIRGA ARSAPVSPAS STTGVHKLQR AFSNLSSSKH GSISASSNGQ ENIDQLEMLL EAYFVVVDSA
101: LNKLSSLKEY IDDTEDLINI KLANVQNQLI QFELLLTAAT FVATIFAMVT AVFGMNLKAT VFDDPDGFDW TIIITGIFCL VLYIAFMIYF KHKKLLPL

Best Arabidopsis Sequence Match ( AT1G16010.2 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.