CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g00450.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	73.43	72.21
Solyc05g012220.2.1	Tomato	cytosol, peroxisome, plasma membrane	65.46	65.3
AT2G03620.2	Thale cress	cytosol, nucleus, peroxisome	65.46	64.37
Bra025121.1-P	Field mustard	cytosol, nucleus, peroxisome	64.73	63.66
CDY51207	Canola	cytosol, nucleus, peroxisome	64.73	63.66
CDY02984	Canola	cytosol, peroxisome, plasma membrane	64.73	63.66
CDY36615	Canola	cytosol, nucleus, peroxisome	64.73	63.66
PGSC0003DMT400072765	Potato	cytosol, peroxisome, plasma membrane	28.74	60.1
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	59.66	59.66
KRH09638	Soybean	plastid	58.45	54.63
KRH23679	Soybean	plastid	58.21	54.4
KRH59642	Soybean	cytosol	17.87	45.12
KRH77919	Soybean	cytosol	40.34	42.49
KRH34378	Soybean	cytosol, peroxisome, plastid	38.89	41.28
KRG95626	Soybean	cytosol	38.65	41.24
KRH27585	Soybean	cytosol	39.61	41.1
KRG92427	Soybean	cytosol, peroxisome, plasma membrane	39.13	41.01
KRH67301	Soybean	cytosol	38.41	40.98
KRH09687	Soybean	mitochondrion	27.05	36.25
KRH23620	Soybean	mitochondrion	34.54	34.46
KRH59146	Soybean	plastid	37.2	34.15
KRH43038	Soybean	plastid	36.72	33.78
KRH40989	Soybean	mitochondrion	32.85	33.09
KRH33492	Soybean	cytosol	17.87	32.31
KRH26555	Soybean	plastid	19.81	17.94
KRH22756	Soybean	mitochondrion, plastid	19.57	17.76

Protein Annotations

Gene3D:1.20.58.340	EntrezGene:100803935	Gene3D:2.40.128.330	MapMan:24.3.3.1	EMBL:ACUP02000820	ncoils:Coil
EnsemblPlantsGene:GLYMA_02G117100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873	GO:GO:0055085
GO:GO:1903830	UniProt:I1JEF4	EnsemblPlants:KRH70907	ProteinID:KRH70907	ProteinID:KRH70907.1	InterPro:MgTranspt_CorA/ZnTranspt_ZntB
PFAM:PF01544	PANTHER:PTHR13890	PANTHER:PTHR13890:SF11	SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI00023BEF49
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:11400594..11409016

Molecular Weight (calculated)

46438.7 Da

IEP (calculated)

4.905

GRAVY (calculated)

-0.089

Length

414 amino acids

Sequence
(BLAST)

001: MDETQDHYYS SSLPESSLSH DGGGRSYFNG QINRGTAISG LKKRGHGSRS WIKIGQDGNF QTVTLDKATI MRYCSLPSRD LRLLDPMFIY PSTILGREKA
101: IVVNLEQIRC IITADEVILM NSLDGSVGQY RLELCNRLQN EKADDLPFEF RALELALELT CTSLDAQVNE LEMEIYPVLD ELASSISTLN LERVRRFKGH
201: LLALTQRVQK VRDEIEHLMD DDGDMAEMCL TEKKRRSDTC TFNDCFQTRA SGRLISKSAP ASPERTISGV QMLQRAFSSI GNSSKHGSSM GSSDNGERIE
301: PLEMLLEAYF IVIDNTLNTI LSLKEYIDDT EDFINIKLGN IQNQLIQFEL LLTAATLVAA VFAAVAGVFG MNFETTVFDY PSGFHWVLVI TGIACIALYF
401: ALLFYFRYKK VLAA

Best Arabidopsis Sequence Match ( AT2G03620.2 )
(BLAST)

001: MGEQLDPFSA SNLPDFISSQ KIGRPVNFEG QTNRGHPFSG LKKRGQSSRS WVKIDQDGNS AVLELDKATI MKRCSLPSRD LRLLDPLFIY PSSILGRERA
101: IVVSLEKIRC IITAEEVILM NARDASVVQY QSELCKRLQS NHNLNVKDDL PFEFKALELV LELSCLSLDA QVNELEMEVY PVLDELATNI STLNLEHVRR
201: LKGRLLTLTQ KVQKVCDEIE HLMDDDDDMA EMYLTEKKER AEAHASEELE DNIGEDFESS GIVSKSAPVS PVGSTSGNFG KLQRAFSSIV GSHKSLLSSS
301: SIGENIDQLE MLLEAYFVVV DNTLSKLSSL KEYIDDTEDL INIKLGNVQN QLIQFQLLLT AATFVAAIFA AVTAVFGMNL QDSVFQNPTT FQYVLLITGI
401: GCGFLYFGFV LYFKHKKVFP L

Arabidopsis Description

MRS2-5Magnesium transporter MRS2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR4]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.