CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
extracellular 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22756	Soybean	mitochondrion, plastid	94.75	94.96
VIT_06s0061g01060.t01	Wine grape	plastid	73.96	75.78
GSMUA_Achr7P01670_001	Banana	cytosol	23.41	71.81
Solyc11g066660.1.1	Tomato	plastid	65.65	67.11
CDY26960	Canola	plastid	67.18	67.03
HORVU4Hr1G004120.2	Barley	plastid	62.8	66.28
AT5G22830.1	Thale cress	plastid	66.52	66.23
CDX92333	Canola	plastid	66.96	65.81
Bra002432.1-P	Field mustard	plastid	67.18	65.74
TraesCS4D01G025300.1	Wheat	plastid	62.14	63.53
TraesCS4B01G027800.1	Wheat	plastid	62.14	63.39
TraesCS4A01G286400.1	Wheat	plastid	61.93	63.17
PGSC0003DMT400001226	Potato	mitochondrion	54.05	63.01
GSMUA_Achr8P03230_001	Banana	mitochondrion	67.18	62.02
OQU91190	Sorghum	plastid	62.36	61.56
Os03t0684400-01	Rice	plastid	62.8	60.55
Zm00001d033527_P001	Maize	plastid	61.71	55.73
GSMUA_Achr7P01660_001	Banana	plastid	34.57	52.67
KRH59642	Soybean	cytosol	9.41	26.22
KRH67301	Soybean	cytosol	19.91	23.45
KRG95626	Soybean	cytosol	19.26	22.68
KRH34378	Soybean	cytosol, peroxisome, plastid	19.04	22.31
KRG92427	Soybean	cytosol, peroxisome, plasma membrane	19.26	22.28
KRH09638	Soybean	plastid	21.44	22.12
KRH23679	Soybean	plastid	21.23	21.9
KRH77919	Soybean	cytosol	17.94	20.87
KRH40989	Soybean	mitochondrion	18.6	20.68
KRH23620	Soybean	mitochondrion	18.38	20.24
KRH09687	Soybean	mitochondrion	13.57	20.06
KRH27585	Soybean	cytosol	17.51	20.05
KRH70907	Soybean	cytosol, nucleus, plasma membrane	17.94	19.81
KRH43038	Soybean	plastid	17.51	17.78
KRH59146	Soybean	plastid	17.29	17.52
KRH33492	Soybean	cytosol	8.1	16.16

Protein Annotations

Gene3D:1.20.58.340	EntrezGene:100807024	Gene3D:2.40.128.330	MapMan:24.3.3.1	EMBL:ACUP02007720	ncoils:Coil
EnsemblPlantsGene:GLYMA_12G180000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0015095
GO:GO:0016020	GO:GO:0016021	GO:GO:1903830	UniProt:K7LVN0	EnsemblPlants:KRH26555	ProteinID:KRH26555
ProteinID:KRH26555.1	PANTHER:PTHR13890	PANTHER:PTHR13890:SF25	TMHMM:TMhelix	UniParc:UPI000233C57E	SEG:seg

Description

hypothetical protein

Coordinates

chr12:-:34047574..34053748

Molecular Weight (calculated)

51106.8 Da

IEP (calculated)

5.287

GRAVY (calculated)

-0.123

Length

457 amino acids

Sequence
(BLAST)

001: MALSWPHVLQ FRSQPLLGHA NCVFFSDLPE SRSLELSCSD SYTLLRRCKI SGHSPATVKP AVKCLSRSTE EKQWSDAETA VSDSDEVADE PNDQERTSAP
101: TNGRFESQRI ATTSSGDSLS LGIREPVYEV VEVRSNGKVS TRKINRRQLL KSSGLRPRDI RSVDPSLFMT NSMPALLVRE YAILLNLGSL RAIAMQDCVL
201: IFDNNGIGGK AFLETLLPRL NPKINNGGPS MPFELEVVEA ALLSRIQRLE QRLMELEPRV QALLEALPNR LTGDILEQLR ISKQTLVELG SKAGALRQML
301: LDLLEDPHEI RRICIMGRNC TLSKGNNDME CSVPFEKQIA EEEEEEIEML LENYLQRCES CHGQAERLLD SAREMEDSIA VSLSSRRLEV SRVELLLQVG
401: TFCVAIGALV AGIFGMNLKS YLEEHVLAFW LTTAGIIIGG IIAFFLMYSY LRARKIF

Best Arabidopsis Sequence Match ( AT5G22830.2 )
(BLAST)

001: MALTPIPSTF TSLFNFSDHS PYPSPSLHYL LPGSSPSFSL QLSALSRTPI YFEALKVLSR SKCFAKSPTT AEDFVGDYES LNVSDDDDGS DSNSSDGDNG
101: GGRDDSKKID SSSSSSSSDS TSLGIREPVY EVVEVKATGA ISTRKINRRQ LLKSSGLRPR DIRSVDPSLF MTNSVPSLLV REHAILLNLG SLRAIAMRDR
201: VLIFDYNRRG GRAFVDTLMP RLNPRSMNGG PSMPFELEAV ESALISRIQR LEQRLMDIEP RVQALLEVLP NRLTADILEE LRISKQRLVE LGSRAGALRQ
301: MLLDLLEDPH EIRRICIMGR NCTLRRGDDD LECTLPSDKL IAEEEEEEIE MLLENYLQRC ESCHGQAERL LDSAKEMEDS IAVNLSSRRL EVSRFELLLQ
401: VGTFCVAVGA LIAGIFGMNL RSYLEEQASA FWLTTGGIII GAAVAFFLMY SYLSRRKIF

Arabidopsis Description

MRS2-11MRS2-11 [Source:UniProtKB/TrEMBL;Acc:A0A178ULQ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.