Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G19640.1 | KRH42545 | AT1G70780.1 | 21798944 |
| AT3G19640.1 | KRH58638 | AT1G70780.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27585 | Soybean | cytosol | 91.6 | 90.23 |
| Bra022441.1-P | Field mustard | cytosol | 70.74 | 63.04 |
| CDY66275 | Canola | cytosol, peroxisome, plasma membrane | 70.74 | 63.04 |
| VIT_03s0091g01190.t01 | Wine grape | cytosol | 77.86 | 61.08 |
| Solyc01g106900.2.1 | Tomato | cytosol, peroxisome, plastid | 77.1 | 60.84 |
| PGSC0003DMT400066130 | Potato | cytosol, peroxisome, plastid | 76.59 | 60.44 |
| KRH59642 | Soybean | cytosol | 24.94 | 59.76 |
| AT3G19640.1 | Thale cress | cytosol, golgi, peroxisome, plastid | 72.01 | 58.47 |
| CDX95430 | Canola | cytosol, golgi, peroxisome | 67.68 | 58.46 |
| Bra038223.1-P | Field mustard | cytosol, golgi, peroxisome | 68.19 | 58.26 |
| CDY42196 | Canola | cytosol | 67.43 | 58.11 |
| GSMUA_Achr5P01890_001 | Banana | nucleus | 68.96 | 54.75 |
| KRH09687 | Soybean | mitochondrion | 38.42 | 48.87 |
| KRH23620 | Soybean | mitochondrion | 50.89 | 48.19 |
| KRH40989 | Soybean | mitochondrion | 48.35 | 46.23 |
| KRH34378 | Soybean | cytosol, peroxisome, plastid | 44.53 | 44.87 |
| KRH23679 | Soybean | plastid | 49.87 | 44.24 |
| KRG92427 | Soybean | cytosol, peroxisome, plasma membrane | 44.27 | 44.05 |
| KRH09638 | Soybean | plastid | 49.62 | 44.02 |
| KRH67301 | Soybean | cytosol | 43.26 | 43.81 |
| KRG95626 | Soybean | cytosol | 43.0 | 43.56 |
| KRH70907 | Soybean | cytosol, nucleus, plasma membrane | 42.49 | 40.34 |
| CDY58861 | Canola | nucleus | 70.48 | 37.95 |
| KRH33492 | Soybean | cytosol | 20.61 | 35.37 |
| KRH43038 | Soybean | plastid | 38.42 | 33.56 |
| KRH59146 | Soybean | plastid | 38.42 | 33.48 |
| KRH22756 | Soybean | mitochondrion, plastid | 20.87 | 17.98 |
| KRH26555 | Soybean | plastid | 20.87 | 17.94 |
Protein Annotations
| Gene3D:1.20.58.340 | EntrezGene:100819578 | Gene3D:2.40.128.330 | MapMan:24.3.3.1 | EMBL:ACUP02000686 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_01G242000 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015095 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:1903830 | UniProt:I1JAX6 | EnsemblPlants:KRH77919 |
| ProteinID:KRH77919 | ProteinID:KRH77919.1 | PANTHER:PTHR13890 | PANTHER:PTHR13890:SF4 | TMHMM:TMhelix | UniParc:UPI0002336EB1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:56560321..56563074
Molecular Weight (calculated)
43975.6 Da
IEP (calculated)
4.662
GRAVY (calculated)
-0.197
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGGEERSTG IRKKGSGVRQ WLVLDGRGET EVVEAGKHAI MRRTGLPARD LRILDPLLSY PSTLLGRERA IVINLEHIKA IITAHEVLLL NSRDPSVTPF
101: LQELQARILR HHHQTLADAN PNPDDAIKIL PFEFVALEAC LEAACSVLEN EAKTLEQEAH PALDKLTSKI STLNLERVRQ IKSRLVAITG RVQKVRDELE
201: HLLDDDDDMA EMYLSEKLAE QDDLEKAEDT SSADDVDDHI DRTAPEISLD NVVGRDSHGT RDSATYSAVT KQLDVEELEM LLEAYFVQID GTLNKLSTLR
301: EYVDDTEDYI NIMLDDKQNH LLQMGVMLTT ATLVVSAFVV VAGIFGMNIH IELFDDQKAG MTQFLWTVGG STAGTIFLYV VAIAWCKHKR LLE
101: LQELQARILR HHHQTLADAN PNPDDAIKIL PFEFVALEAC LEAACSVLEN EAKTLEQEAH PALDKLTSKI STLNLERVRQ IKSRLVAITG RVQKVRDELE
201: HLLDDDDDMA EMYLSEKLAE QDDLEKAEDT SSADDVDDHI DRTAPEISLD NVVGRDSHGT RDSATYSAVT KQLDVEELEM LLEAYFVQID GTLNKLSTLR
301: EYVDDTEDYI NIMLDDKQNH LLQMGVMLTT ATLVVSAFVV VAGIFGMNIH IELFDDQKAG MTQFLWTVGG STAGTIFLYV VAIAWCKHKR LLE
001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE
Arabidopsis Description
MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]
SUBAcon: [peroxisome,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.