Factsheet for Bra038223.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003942.1-P
Bra007943.1-P
Bra016187.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19640.1	Bra003942.1-P	AT1G70780.1	21798944
AT3G19640.1	Bra007943.1-P	AT1G70780.1	21798944
AT3G19640.1	Bra016187.1-P	AT1G70780.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42196	Canola	cytosol	96.96	97.81
CDX95430	Canola	cytosol, golgi, peroxisome	95.22	96.26
Bra022441.1-P	Field mustard	cytosol	76.3	79.59
AT3G19640.1	Thale cress	cytosol, golgi, peroxisome, plastid	78.91	75.0
KRH77919	Soybean	cytosol	58.26	68.19
KRH27585	Soybean	cytosol	56.96	65.66
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	64.78	59.84
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	64.35	59.44
VIT_03s0091g01190.t01	Wine grape	cytosol	64.35	59.08
OQU81611	Sorghum	peroxisome, plasma membrane, plastid	14.35	51.97
Zm00001d012102_P001	Maize	mitochondrion	50.0	51.92
EES04071	Sorghum	mitochondrion	49.35	51.24
TraesCS3B01G448800.1	Wheat	mitochondrion	50.0	51.22
Zm00001d042441_P001	Maize	mitochondrion	49.13	51.02
TraesCS3A01G414000.1	Wheat	mitochondrion	50.0	51.0
TraesCS3D01G408500.1	Wheat	mitochondrion	49.78	50.89
GSMUA_Achr5P01890_001	Banana	nucleus	54.57	50.71
HORVU3Hr1G092200.1	Barley	mitochondrion	49.35	50.67
Os01t0908500-01	Rice	plasma membrane	48.48	50.23
TraesCS3A01G380600.1	Wheat	mitochondrion	43.26	49.14
TraesCS3B01G413200.1	Wheat	mitochondrion	43.26	49.14
TraesCS3D01G373700.1	Wheat	mitochondrion	43.04	48.89
HORVU3Hr1G082870.5	Barley	mitochondrion	42.83	48.52
Bra008431.1-P	Field mustard	plasma membrane	39.13	48.52
KXG25477	Sorghum	plastid	37.83	48.47
TraesCS3B01G413100.1	Wheat	cytosol, nucleus, plastid, vacuole	42.39	47.91
TraesCS3D01G373600.1	Wheat	mitochondrion	41.96	47.42
Zm00001d003666_P001	Maize	mitochondrion	40.87	46.65
EES01822	Sorghum	mitochondrion	41.96	46.62
TraesCS3A01G380500.1	Wheat	mitochondrion	41.3	46.57
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.3	46.34
KXG34188	Sorghum	plasma membrane	14.78	45.95
Os01t0869200-01	Rice	mitochondrion, plastid	41.74	45.93
HORVU3Hr1G082880.2	Barley	cytosol, mitochondrion, peroxisome, vacuole	41.52	45.58
EES10822	Sorghum	mitochondrion	41.3	45.13
Os04t0430900-00	Rice	cytosol, plastid	41.09	44.37
Zm00001d025416_P001	Maize	mitochondrion	38.26	44.22
Bra026085.1-P	Field mustard	plastid	41.09	42.47
Bra031913.1-P	Field mustard	cytosol	31.3	42.23
Bra028621.1-P	Field mustard	cytosol	35.65	42.16
Bra037781.1-P	Field mustard	cytosol, mitochondrion, plastid	35.0	41.93
Bra025121.1-P	Field mustard	cytosol, nucleus, peroxisome	37.17	40.62
Bra024309.1-P	Field mustard	cytosol, peroxisome, plastid	34.57	40.56
Bra022373.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	31.52	34.52
Bra007423.1-P	Field mustard	plastid	31.96	34.27
Bra032683.1-P	Field mustard	plastid	24.78	33.24
Bra002432.1-P	Field mustard	plastid	17.39	17.13

Protein Annotations

EnsemblPlants:Bra038223.1	EnsemblPlants:Bra038223.1-P	EnsemblPlantsGene:Bra038223	Gene3D:1.20.58.340	Gene3D:2.40.128.330	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	ncoils:Coil	PANTHER:PTHR13890	PANTHER:PTHR13890:SF4	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002544C97	UniProt:M4FAV8	MapMan:24.3.3.1	:	:

Description

AT3G19640 (E=4e-167) | magnesium transporter CorA-like family protein (MRS2-3)

Coordinates

chrA01:-:21515821..21518178

Molecular Weight (calculated)

50598.4 Da

IEP (calculated)

5.358

GRAVY (calculated)

-0.266

Length

460 amino acids

Sequence
(BLAST)

001: MRGPRPEDFD TNAGHPTPTF PAGGSRKKGM GVRTWLVLCS SGKEQATEAG KHTIMRRTGL PARDLRILDP LLSYPSTVLG RERAIVINLE HIKAIITGQE
101: VLILNSKDPS VAPFIEELQR RIRCHHHATK PQEGVNTEGA AQGEAGTSQL FGEEAKKGAK QSLGNQDGSK VLPFEFVALE ACLEAAITSL ESEAVRLELE
201: AHPALDKLTI KISTLNLERV RQIKSRLVAI TGRVQKVRDE LEKLLNDDED MAEMYLTDKL AQKLENSSAS STSDTVVVDL PEGDEDDRHV ADYFEHATLV
301: SSESCHRGSD AHNLLMRAHS ALSRNSRGTS STRSGMTNKL NVQELEMLLE AYFVQIDGTL NKLSTLTEYV DDTEDYINIM LDDKQNNLLQ MGVMLTTAGL
401: VMSLFIAVAG VFGMNINIEL FNDEVAGPGK FMWTVVGGTA GSLFLYFGAI GWYKHSRLLE

Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)

001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE

Arabidopsis Description

MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.