Factsheet for Bra025121.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51207	Canola	cytosol, nucleus, peroxisome	99.29	99.29
CDY36615	Canola	cytosol, nucleus, peroxisome	99.29	99.29
CDY02984	Canola	cytosol, peroxisome, plasma membrane	99.05	99.05
AT2G03620.2	Thale cress	cytosol, nucleus, peroxisome	93.35	93.35
Solyc05g012220.2.1	Tomato	cytosol, peroxisome, plasma membrane	65.8	66.75
VIT_01s0011g00450.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	66.51	66.51
PGSC0003DMT400072765	Potato	cytosol, peroxisome, plasma membrane	30.88	65.66
KRH70907	Soybean	cytosol, nucleus, plasma membrane	63.66	64.73
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	58.43	59.42
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.92	55.37
Bra008431.1-P	Field mustard	plasma membrane	48.46	54.99
Bra026085.1-P	Field mustard	plastid	54.16	51.24
Bra037781.1-P	Field mustard	cytosol, mitochondrion, plastid	37.77	41.41
Bra024309.1-P	Field mustard	cytosol, peroxisome, plastid	38.48	41.33
Bra028621.1-P	Field mustard	cytosol	37.77	40.87
Bra031913.1-P	Field mustard	cytosol	33.02	40.76
Bra022441.1-P	Field mustard	cytosol	41.33	39.46
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	40.62	37.17
Bra022373.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	34.44	34.52
Bra007423.1-P	Field mustard	plastid	34.68	34.03
Bra032683.1-P	Field mustard	plastid	24.47	30.03
Bra002432.1-P	Field mustard	plastid	19.95	17.99

Protein Annotations

EnsemblPlants:Bra025121.1	EnsemblPlants:Bra025121.1-P	EnsemblPlantsGene:Bra025121	Gene3D:1.20.58.340	Gene3D:2.40.128.330	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015095	GO:GO:0016020
GO:GO:0016021	GO:GO:1903830	PANTHER:PTHR13890	PANTHER:PTHR13890:SF11	SEG:seg	TMHMM:TMhelix
UniParc:UPI000253F801	UniProt:M4E8L5	MapMan:24.3.3.1	:	:	:

Description

AT2G03620 (E=4e-180) | magnesium transporter CorA-like family protein (MRS2-5)

Coordinates

chrA06:+:23340772..23342458

Molecular Weight (calculated)

46886.4 Da

IEP (calculated)

4.691

GRAVY (calculated)

-0.072

Length

421 amino acids

Sequence
(BLAST)

001: MGEQPDPFSA STLPDFISSQ KIGRPVTLEG QSNRGHPYSG LKKRGQSSRS WVKIDENGNS TVLELDKATI MKRCSLPSRD LRLLDPLFIY PSSILGRERA
101: IVVSLEKIRC IITAEEVILM NARDASVVQY QSELCKRLQS NQNLNLKDDL PFEFKALELV LELSCLSLDA QVNELEMEVY PVLDELATNI STLNLEHVRR
201: LKGRLLALTQ KVQKVCDEIE HLMDDDDDMA EMYLTEKKER SEAHASVELE DNLDDDFGSS GIVSKSAPVS PVGSTSGNLG KLQRAFSSVV GSHRSLLSSS
301: SSGENIDQLE MLLEAYFVVV DNTLSKLSSL KEYIDDTEDL INIKLGNVQN QLIQFQLLLT AATFVAAIFA AVTAVFGMNL QDSVFKDPTM FQWVLLVTGI
401: GCGLLYFGFV LYFKHKKVFP L

Best Arabidopsis Sequence Match ( AT2G03620.2 )
(BLAST)

001: MGEQLDPFSA SNLPDFISSQ KIGRPVNFEG QTNRGHPFSG LKKRGQSSRS WVKIDQDGNS AVLELDKATI MKRCSLPSRD LRLLDPLFIY PSSILGRERA
101: IVVSLEKIRC IITAEEVILM NARDASVVQY QSELCKRLQS NHNLNVKDDL PFEFKALELV LELSCLSLDA QVNELEMEVY PVLDELATNI STLNLEHVRR
201: LKGRLLTLTQ KVQKVCDEIE HLMDDDDDMA EMYLTEKKER AEAHASEELE DNIGEDFESS GIVSKSAPVS PVGSTSGNFG KLQRAFSSIV GSHKSLLSSS
301: SIGENIDQLE MLLEAYFVVV DNTLSKLSSL KEYIDDTEDL INIKLGNVQN QLIQFQLLLT AATFVAAIFA AVTAVFGMNL QDSVFQNPTT FQYVLLITGI
401: GCGFLYFGFV LYFKHKKVFP L

Arabidopsis Description

MRS2-5Magnesium transporter MRS2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR4]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.