Factsheet for Bra024309.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51292	Canola	cytosol, peroxisome, plastid	95.41	98.94
CDY56489	Canola	cytosol, peroxisome, plastid	94.64	98.15
Bra037781.1-P	Field mustard	cytosol, mitochondrion, plastid	89.54	91.41
Bra031913.1-P	Field mustard	cytosol	75.0	86.22
AT5G64560.1	Thale cress	cytosol	84.18	83.76
Os03t0742400-01	Rice	plasma membrane	52.04	81.93
VIT_05s0020g04720.t01	Wine grape	cytosol, peroxisome, plasma membrane	78.83	79.43
KRG92427	Soybean	cytosol, peroxisome, plasma membrane	77.3	76.71
KRH34378	Soybean	cytosol, peroxisome, plastid	76.02	76.41
EER90897	Sorghum	cytosol	75.26	76.23
Bra028621.1-P	Field mustard	cytosol	75.51	76.09
TraesCS5D01G391700.1	Wheat	plastid	73.98	74.74
HORVU5Hr1G094250.1	Barley	plastid	73.72	74.48
TraesCS5A01G382400.1	Wheat	plastid	73.72	73.72
Solyc03g005390.2.1	Tomato	cytosol, peroxisome, vacuole	73.72	73.16
TraesCS5B01G386300.1	Wheat	plastid	71.68	72.42
Bra008431.1-P	Field mustard	plasma membrane	44.39	46.9
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.94	44.88
Bra026085.1-P	Field mustard	plastid	47.19	41.57
Bra007423.1-P	Field mustard	plastid	44.39	40.56
Bra022373.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	43.37	40.48
Bra022441.1-P	Field mustard	cytosol	44.13	39.23
Bra025121.1-P	Field mustard	cytosol, nucleus, peroxisome	41.33	38.48
Bra032683.1-P	Field mustard	plastid	31.38	35.86
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	40.56	34.57
Bra002432.1-P	Field mustard	plastid	23.21	19.49

Protein Annotations

Gene3D:2.40.128.330	MapMan:24.3.3.1	EnsemblPlantsGene:Bra024309	EnsemblPlants:Bra024309.1	EnsemblPlants:Bra024309.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0030001	GO:GO:0046873	GO:GO:0055085	UniProt:M4E6A5	InterPro:MgTranspt_CorA/ZnTranspt_ZntB
PFAM:PF01544	PANTHER:PTHR13890	PANTHER:PTHR13890:SF8	SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI000253F411
SEG:seg	:	:	:	:	:

Description

AT5G64560 (E=1e-144) | magnesium transporter CorA-like family protein (MRS2-2)

Coordinates

chrA06:-:14853439..14855483

Molecular Weight (calculated)

43623.7 Da

IEP (calculated)

4.588

GRAVY (calculated)

-0.229

Length

392 amino acids

Sequence
(BLAST)

001: MSYNNNGNVV PAADPLPGKK TKLMSSRSWV SIVATGESET LDVDKYAIMH RVQIHARDLR ILDPNLSYPS TILGRERAVV LNLEHIKAII TADEVLLRDP
101: SDENVIPVLK ELERRLPVGN EAQNGQGDGK ESSSANNDAD AAEEDDSPFE FRALEVFLEA ICSFLAARTT ELETAAYPAL DELTSKISSR NLDRVRKLKS
201: AMTRLTARVQ KVRDELEQLL DDDDDMADLY LSRKLSSASS ASSSPNCYLT SPTIGSKISR ASRASLATAR GDENDVEELE MLLEAYFMQI DSTLNRLTTL
301: REYIDDTEDY INIQLDNHRN QLIQLELVLS SGTVCSAFYS LVAGIFGMNI PYTWNDNHGY MFKYVVILTG AICVILFTFI MSHARYKGLV GS

Best Arabidopsis Sequence Match ( AT5G64560.1 )
(BLAST)

001: MAQNGYLVPA DPSAVVTVKK KTPQASWALI DATGQSEPLD VDKYEIMHRV QIHARDLRIL DPNLSYPSTI LGRERAIVLN LEHIKAIITS EEVLLRDPSD
101: ENVIPVVEEL RRRLPVGNAS HNGGQGDGKE IAGAQNDGDT GDEDESPFEF RALEVALEAI CSFLAARTAE LETAAYPALD ELTSKISSRN LDRVRKLKSA
201: MTRLTARVQK VRDELEQLLD DDDDMADLYL SRKLSSASSP ISSIGEPNWY TTSPTIGSKI SRASRASLAT VHGDENDVEE LEMLLEAYFM QIDSTLNRLT
301: TLREYIDDTE DYINIQLDNH RNQLIQLELV LSSGTVCLSM YSLVAGIFGM NIPYTWNDGH GYMFKYVVGL TGTLCVVVFV IIMSYARYKG LVGS

Arabidopsis Description

MRS2-2Magnesium transporter MRS2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.