Factsheet for Bra022373.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92290	Canola	cytosol, mitochondrion, nucleus, plastid	99.52	99.52
Bra007423.1-P	Field mustard	plastid	80.24	78.55
VIT_12s0034g02550.t01	Wine grape	plastid	70.24	65.12
GSMUA_Achr4P29320_001	Banana	cytosol, peroxisome, plasma membrane	58.57	64.91
KRH59146	Soybean	plastid	67.14	62.53
PGSC0003DMT400064171	Potato	nucleus	63.81	62.04
Solyc01g103890.2.1	Tomato	nucleus	63.57	61.81
KRH43038	Soybean	plastid	65.95	61.56
TraesCS1B01G219000.1	Wheat	mitochondrion	61.43	55.13
TraesCS1D01G208700.1	Wheat	mitochondrion	60.95	55.05
TraesCS1A01G205400.1	Wheat	mitochondrion	60.48	54.74
Bra032683.1-P	Field mustard	plastid	44.29	54.23
HORVU1Hr1G052760.2	Barley	mitochondrion, plastid	61.67	54.07
Zm00001d047388_P001	Maize	mitochondrion, plastid	60.71	53.57
Zm00001d029808_P001	Maize	mitochondrion, plastid	60.71	53.57
EER91996	Sorghum	mitochondrion	60.71	53.35
OQU93276	Sorghum	plastid	45.95	44.68
Bra037781.1-P	Field mustard	cytosol, mitochondrion, plastid	40.71	44.53
Os03t0137700-01	Rice	plastid	45.71	44.14
Bra028621.1-P	Field mustard	cytosol	40.48	43.7
Zm00001d027582_P001	Maize	plastid	45.48	43.61
Bra024309.1-P	Field mustard	cytosol, peroxisome, plastid	40.48	43.37
Bra031913.1-P	Field mustard	cytosol	34.76	42.82
Bra008431.1-P	Field mustard	plasma membrane	33.57	38.01
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.19	37.07
Bra022441.1-P	Field mustard	cytosol	36.43	34.69
Bra025121.1-P	Field mustard	cytosol, nucleus, peroxisome	34.52	34.44
Bra026085.1-P	Field mustard	plastid	36.43	34.38
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	34.52	31.52
Bra002432.1-P	Field mustard	plastid	18.81	16.92

Protein Annotations

Gene3D:2.40.128.330	MapMan:24.3.3.1	EnsemblPlantsGene:Bra022373	EnsemblPlants:Bra022373.1	EnsemblPlants:Bra022373.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
GO:GO:0055085	GO:GO:1903830	UniProt:M4E0S6	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544	PANTHER:PTHR13890
PANTHER:PTHR13890:SF2	SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI0002547F85	SEG:seg	:

Description

AT4G28580 (E=1e-109) | magnesium transporter CorA-like family protein (MRS2-6)

Coordinates

chrA05:-:18103450..18105109

Molecular Weight (calculated)

47181.6 Da

IEP (calculated)

4.647

GRAVY (calculated)

-0.173

Length

420 amino acids

Sequence
(BLAST)

001: MGEGNLSFRR LSSIRHRKKR TAAKDEAESS LISSSPPPTP ITPAAVAAKA AKKKAGGARL WMRFDRTGAM EVVECDKSTI IKRASVPPRD LRILGPVFSH
101: SSNILAREKA IVVNLEVIKL IVTAEEVLLL DPLRPEVLPF VERLKQQFPQ NTDASGNVVQ SSSLLDQEAG EGLQSELPFE FQVLEIALEV VCSLLDTSVD
201: SLETEAWPVL DELTKNVSTE NLEYVRSLKS NLTRLLARVQ KVRDEIEHLL DDNEDMADLY LTRKWIQQNE QSEAELGETA SNRLSRATSN RSSSMVTSNT
301: KDDDVEDLEM LLEAYFMQLE GMRNRILTVR EYIDDTEDYV NIQLDNQRNE MIQLQLTLTI ASFAITANTL LVSLFGMNIH CPLYEMDDVF GYFLSSVTAV
401: CVVLFMLTLG YARWKKLLGS

Best Arabidopsis Sequence Match ( AT3G58970.1 )
(BLAST)

001: MGKGPLSFRR LSSIRHRKKG SAVKDDSAQT STPSSPPPPL PIHAGGSAVG ATGKAKKKTG GARLWMRFDR TGAMEVVECD KSTIIKRASV PARDLRILGP
101: VFSHSSNILA REKAIVVNLE VIKAIVTAEE VLLLDPLRPE VLPFVERLKQ QFPQRNGNEN ALQASANVQS PLDPEAAEGL QSELPFEFQV LEIALEVVCS
201: FVDKSVAALE TEAWPVLDEL TKNVSTENLE YVRSLKSNLT RLLARVQKVR DELEHLLDDN EDMADLYLTR KWIQNQQTEA ILAGTASNSI ALPAHNTSNL
301: HRLTSNRSAS MVTSNTEEDD VEDLEMLLEA YFMQLDGMRN KILTVREYID DTEDYVNIQL DNQRNELIQL QLTLTIASFA IAAETLLASL FGMNIPCPLY
401: SIHGVFGYFV WSVTALCIVL FMVTLGYARW KKLLGS

Arabidopsis Description

MRS2-4MRS2-4 [Source:UniProtKB/TrEMBL;Acc:A0A178VB54]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.